Uses of Interface
omix.plugin.model.writable.MetaboliteType
Package | Description |
---|---|
omix.plugin.diagram.writable | |
omix.plugin.model.writable |
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Uses of MetaboliteType in omix.plugin.diagram.writable
Methods in omix.plugin.diagram.writable with parameters of type MetaboliteType Modifier and Type Method Description MetaboliteItem
Diagram. createMetaboliteItem(MetaboliteType metaboliteType, CompartmentItem compartment)
MetaboliteItem
Diagram. createMetaboliteItem(MetaboliteType metaboliteType, Compartment compartment)
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Uses of MetaboliteType in omix.plugin.model.writable
Methods in omix.plugin.model.writable that return MetaboliteType Modifier and Type Method Description MetaboliteType
Model. createMetaboliteType(String name)
Creates a new metabolite type.
After creating a new instance, it must be explicitly added to the model byModel.addComponent(AbstractModelComponent)
.
When the metabolite type is added to the model, aMetabolite
is created for each compartment in the model representing the metabolite pools.MetaboliteType
Model. createMetaboliteType(String name, String nameFormat)
Creates a new metabolite type.
After creating a new instance, it must be explicitly added to the model byModel.addComponent(AbstractModelComponent)
.
When the metabolite type is added to the model, aMetabolite
is created for each compartment in the model representing the metabolite pools.MetaboliteType
Model. getMetaboliteType(String name)
Get a metabolite type by name.MetaboliteType
Metabolite. metaboliteType()
returns the type of this metabolite.MetaboliteType
Model. toWritable(MetaboliteType type)
Methods in omix.plugin.model.writable that return types with arguments of type MetaboliteType Modifier and Type Method Description List<? extends MetaboliteType>
Model. metaboliteTypes()
All metabolite types being part of the model.