Publications

This page lists all available scientific publications about Omix®. If you want to cite Omix in you own papers, please, cite one of the articles marked with *.

PhD Thesis

• Droste, P. Customizable visualization in the context of metabolic networks. 2012,

Articles

• * Droste, Peter; Nöh, Katharina; Wiechert, Wolfgang Omix – A Visualization Tool for Metabolic Networks with Highest Usability and Customizability in Focus. Chemie Ingenieur Technik 2013, 85, 6, 849–862. DOI: 10.1002/cite.201200234
  
  
• * Droste, Peter; Miebach, Stephan; Niedenführ, Sebastian; Wiechert, Wolfgang; Nöh, Katharina Visualizing multi-omics data in metabolic networks with the software Omix: a case study. Biosystems 2011, 105, 2, 154–161. DOI: 10.1016/j.biosystems.2011.04.003
  
  
• Dalman, Tolga; Droste, Peter; Weitzel, Michael; Wiechert, Wolfgang; Nöh, Katharina Workflows for Metabolic Flux Analysis: Data Integration and Human Interaction. In Leveraging Applications of Formal Methods, Verification, and Validation; Margaria, Tiziana; Steffen, Bernhard, Eds.; Springer Berlin / Heidelberg; 2010. DOI: 10.1007/978-3-642-16558-0_23
  
  
• Peter Droste; Frieder Hadlich; Wolfgang Wiechert; Ermir Qeli 3D Visualization of Simulation Data in a Network Context: A Case study from Systems Biology. In in Proceedings of the ECMS 2008, Nicosia, Cyprus; S. L. C. Y. Louca; Z.Oplatkova; Khalid Al-Begain, Eds.; 2008. DOI: ISBN 978-0-9553018-5-8
  
  
• Peter Droste; Eric von Lieres; Wolfgang Wiechert; Katharina Nöh Customizable Visualization on Demand for Hierarchically Organized Information in Biochemical Networks. In Computational Modeling of Objects Represented in Images; Reneta P. Barneva; Valentin E. Brimkov; Herbert A. Hauptman; Renato M. Natal Jorge; Joao Manuel R. S. Tavares, Eds.; 2010. DOI: 10.1007/978-3-642-12712-0
  
  
• Peter Droste; Katharina Nöh; Wolfgang Wiechert Omix – Ein höchst anpassbarer Editor für biochemische Netzwerke und Visualisierungswerkzeug für Multi-Omics-Datensätze. In ProcessNet-Jahrestagung 2010 und 28. Jahrestagung der Biotechnologen; 2010. DOI: 10.1002/cite.201050318
  
  
• Peter Droste; Katharina Nöh; Wolfgang Wiechert Omix - Editor für biochemische Netzwerke und Visualisierungswerkzeug. In ProcessNet-Jahrestagung und 27. Jahrestagung der Biotechnologen; 2009. DOI: 10.1002/cite.200950113
  
  
• Peter Droste; Stephan Noack; Katharina Nöh; Wolfgang Wiechert Customizable Visualization of Multi-omics Data in the Context of Biochemical Networks. Visualisation, International Conference in 2009, 21-25. DOI: 10.1109/VIZ.2009.22
  
  
• Peter Droste; Michael Weitzel; Wolfgang Wiechert Visual Exloration of Isotope Labeling Networks in 3D. Bioprocess and Biosystems Engineering 2008, 31, 3, 227-239. DOI: 10.1007/s00449-007-0177-1
  
  
• Droste, Peter; Wiechert, Wolfgang; Nöh, Katharina Semi-automatic drawing of metabolic networks. Information Visualization 2012, 11, 3, DOI: 10.1177/1473871611413565
  
  
• Katharina Nöh and Peter Droste and Wolfgang Wiechert Visual workflows for 13C-metabolic flux analysis. Bioinformatics 2015, 31, 3, 346–354. DOI: 10.1093/bioinformatics/btu585
  
  
• Tillack, J.; Droste, P.; Hackbarth, N.; Wiechert, W.; Nöh, K. Visually-Assisted Modeling of Kinetic Metabolic Networks - From Omix to Modelica and Back. In Mathmod 2012; 2012.