Module omix.api

Package omix.lang.model

Interface MetaboliteType

All Superinterfaces:

Component, Item

@OVLExtensible
public interface MetaboliteType
extends Component

This class represents the type of metabolites in different compartments. This Java interface represents a Model in OVL. It contain all methods available in OVL.

Author:

Dr. Peter Droste, Omix Visualization

Method Summary

Modifier and Type	Method	Description
String	getName()	Returns the name of the item.
Set<? extends PublicIdentifier>	getPublicIdentifiers()	Returns the components public identifiers
List<? extends Metabolite>	metabolites()	Returns all metabolite pools of different compartments.
Model	model()	returns the model.
List<String>	synonyms()	Returns the synonyms of the item.

Methods inherited from interface omix.lang.model.Component

customPropertyNames, getCustomProperty, getIdentifier, id, onload, setCustomProperty, setTmpCustomProperty

Method Details

getName

String getName()

Returns the name of the item.

Returns:

name

model

Model model()

returns the model.

Returns:

model

metabolites

List<? extends Metabolite> metabolites()

Returns all metabolite pools of different compartments.

Returns:

list of all metabolite pools

synonyms

@OVLField List<String> synonyms()

Returns the synonyms of the item.

Returns:

synonyms

Since:

Omix 1.9.0

getPublicIdentifiers

Set<? extends PublicIdentifier> getPublicIdentifiers()

Returns the components public identifiers

Returns:

set of public identifiers

Since:

Omix 1.9.0