Module omix.api

Package omix.lang.model

Interface Metabolite

All Superinterfaces:

BioNode, Component, Item, MetNode, Node

@OVLExtensible
public interface Metabolite
extends BioNode

Represents all instances of a metabolite pool in the metabolic network diagram. Metabolite pools of the same type of metabolite but in different compartments are separately given as different metabolite objects.
This Java interface represents a Metabolite in OVL. It contain all methods available in OVL. The static fields in this interface declaration are public non-static instance fields in OVL. They can be read and written from OVL code.

Author:

Dr. Peter Droste, Omix Visualization

Method Summary

Modifier and Type	Method	Description
Compartment	compartment()	returns the compartment this metabolite pool lays in.
MetaboliteType	metaboliteType()	returns the type of this metabolite.

Methods inherited from interface omix.lang.model.BioNode

blur, collapsed, effectorEdges, fillLevel, fillLevelIndication, font, getName, getPublicIdentifiers, inEdges, outEdges, paint, scale, shadow, shape, strokeColor, strokeStyle, strokeWidth, synonyms, textBrush, textStrokeColor, textStrokeWidth, transparency

Methods inherited from interface omix.lang.model.Component

customPropertyNames, getCustomProperty, getIdentifier, id, onload, setCustomProperty, setTmpCustomProperty

Methods inherited from interface omix.lang.model.Node

comments, getComment, graphicsEdges, hidden, linkEdges, model, network

Method Details

compartment

Compartment compartment()

returns the compartment this metabolite pool lays in.

Returns:

compartment

metaboliteType

MetaboliteType metaboliteType()

returns the type of this metabolite.

Returns:

metaboliteType