Uses of Interface
omix.plugin.identity.PublicIdentifier

Packages that use PublicIdentifier

Package	Description
omix.plugin.data
omix.plugin.identity
omix.plugin.model
omix.plugin.model.writable

Uses of PublicIdentifier in omix.plugin.data

Methods in omix.plugin.data that return types with arguments of type PublicIdentifier

Modifier and Type	Method	Description
Set<? extends PublicIdentifier>	ExtendedHeaderData.getPublicIdentifiers()

Uses of PublicIdentifier in omix.plugin.identity

Methods in omix.plugin.identity that return PublicIdentifier

Modifier and Type	Method	Description
PublicIdentifier	PublicIdentifierManager.getPublicIdentifier(String collectionID, String identifier)
PublicIdentifier	PublicIdentifierManager.getPublicIdentifier(IdentifierCollection identifierCollection, String identifier)
PublicIdentifier	PublicIdentifierManager.getPublicIdentifierForURL(URL url)

Methods in omix.plugin.identity that return types with arguments of type PublicIdentifier

Modifier and Type	Method	Description
Set<PublicIdentifier>	PublicIdentifierProviderInterface.providePublicIdentifiers(Compartment item, PublicIdentifierManager registry)
default Set<PublicIdentifier>	PublicIdentifierProviderInterface.providePublicIdentifiers(Metabolite item, PublicIdentifierManager registry)
Set<PublicIdentifier>	PublicIdentifierProviderInterface.providePublicIdentifiers(MetaboliteType item, PublicIdentifierManager registry)
Set<PublicIdentifier>	PublicIdentifierProviderInterface.providePublicIdentifiers(Model item, PublicIdentifierManager registry)
Set<PublicIdentifier>	PublicIdentifierProviderInterface.providePublicIdentifiers(Pathway item, PublicIdentifierManager registry)
Set<PublicIdentifier>	PublicIdentifierProviderInterface.providePublicIdentifiers(Reaction item, PublicIdentifierManager registry)

Uses of PublicIdentifier in omix.plugin.model

Methods in omix.plugin.model that return types with arguments of type PublicIdentifier

Modifier and Type	Method	Description
Set<? extends PublicIdentifier>	AbstractBioNode.getPublicIdentifiers()	Returns the components public identifiers
Set<? extends PublicIdentifier>	Compartment.getPublicIdentifiers()	Returns the components public identifiers
Set<? extends PublicIdentifier>	MetaboliteType.getPublicIdentifiers()	Returns the components public identifiers
Set<? extends PublicIdentifier>	Model.getPublicIdentifiers()	Returns the components public identifiers
Set<? extends PublicIdentifier>	Pathway.getPublicIdentifiers()	Returns the components public identifiers

Uses of PublicIdentifier in omix.plugin.model.writable

Methods in omix.plugin.model.writable that return types with arguments of type PublicIdentifier

Modifier and Type	Method	Description
Set<? extends PublicIdentifier>	Model.getPublicIdentifiers()	Returns the components public identifiers

Methods in omix.plugin.model.writable with parameters of type PublicIdentifier

Modifier and Type	Method	Description
void	Compartment.addPublicIdentifier(PublicIdentifier publicIdentifier)	Adds a public identifier to the item.
void	MetaboliteType.addPublicIdentifier(PublicIdentifier publicIdentifier)	Adds a public identifier to the item.
void	Model.addPublicIdentifier(PublicIdentifier publicIdentifier)	Adds a public identifier to the model.
void	Pathway.addPublicIdentifier(PublicIdentifier publicIdentifier)	Adds a public identifier to the item.
void	Reaction.addPublicIdentifier(PublicIdentifier publicIdentifier)	Adds a public identifier to the item.
void	Compartment.removePublicIdentifier(PublicIdentifier publicIdentifier)	Removes the public identifier from the item.
void	MetaboliteType.removePublicIdentifier(PublicIdentifier publicIdentifier)	Removes the public identifier from the item.
void	Model.removePublicIdentifier(PublicIdentifier publicIdentifier)	Removes the public identifier from the model.
void	Pathway.removePublicIdentifier(PublicIdentifier publicIdentifier)	Removes the public identifier from the item.
void	Reaction.removePublicIdentifier(PublicIdentifier publicIdentifier)	Removes the public identifier from the item.

Method parameters in omix.plugin.model.writable with type arguments of type PublicIdentifier

Modifier and Type	Method	Description
void	Compartment.setPublicIdentifiers(Collection<? extends PublicIdentifier> publicIdentifiers)	Set the public identifiers of the item.
void	MetaboliteType.setPublicIdentifiers(Collection<? extends PublicIdentifier> publicIdentifiers)	Set the public identifiers of the item.
void	Model.setPublicIdentifiers(Collection<? extends PublicIdentifier> publicIdentifiers)	Set the public identifiers of the model.
void	Pathway.setPublicIdentifiers(Collection<? extends PublicIdentifier> publicIdentifiers)	Set the public identifiers of the item.
void	Reaction.setPublicIdentifiers(Collection<? extends PublicIdentifier> publicIdentifiers)	Set the public identifiers of the item.