Uses of Class omix.plugin.util.IllegalChangeException (Omix API)

Packages that use IllegalChangeException
Package	Description
omix.plugin.diagram.writable
omix.plugin.diagram.writable.accessory
omix.plugin.diagram.writable.accessory.annotation
omix.plugin.diagram.writable.pattern
omix.plugin.model.accessory.annotation
omix.plugin.model.writable
omix.plugin.model.writable.accessory
omix.plugin.model.writable.accessory.annotation
omix.plugin.model.writable.accessory.trigger
omix.plugin.model.writable.points	This package contains polynominal describing point types.
omix.plugin.motifstamp.writable

Uses of IllegalChangeException in omix.plugin.diagram.writable

Methods in omix.plugin.diagram.writable that throw IllegalChangeException
Modifier and Type	Method	Description
`void`	Diagram.`changePositionOfNodes(List<Diagram.NewNodePosition> newPositions)`	Set the positions of the items as specified in the NewNodePosition objects.
`void`	AbstractEdgeItem.`setAccessoryAnchorFloating(boolean accessoryAnchorFloating)`
`void`	AbstractNodeItem.`setAccessoryAnchorFloating(boolean accessoryAnchorFloating)`
`void`	CompartmentItem.`setAccessoryAnchorFloating(boolean accessoryAnchorFloating)`
`void`	PathwayItem.`setAccessoryAnchorFloating(boolean accessoryAnchorFloating)`
`void`	AbstractEdgeItem.`setAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	AbstractNodeItem.`setAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	CompartmentItem.`setAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	PathwayItem.`setAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	AbstractEdgeItem.`setAccessoryAnchorPosition(double accessoryAnchorX, double accessoryAnchorY)`	Changes the position of the item's accessory anchor.
`void`	AbstractNodeItem.`setAccessoryAnchorPosition(double accessoryAnchorX, double accessoryAnchorY)`	Changes the position of the item's accessory anchor.
`void`	CompartmentItem.`setAccessoryAnchorPosition(double accessoryAnchorX, double accessoryAnchorY)`	Changes the position of the item's accessory anchor.
`void`	PathwayItem.`setAccessoryAnchorPosition(double accessoryAnchorX, double accessoryAnchorY)`	Changes the position of the item's accessory anchor.
`void`	AbstractEdgeItem.`setAccessoryFloating(boolean accessoryAnchorFloating)`
`void`	AbstractNodeItem.`setAccessoryFloating(boolean accessoryFloating)`
`void`	CompartmentItem.`setAccessoryFloating(boolean accessoryFloating)`
`void`	PathwayItem.`setAccessoryFloating(boolean accessoryFloating)`
`void`	AbstractEdgeItem.`setAccessoryOrientation(Orientation accessoryOrientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	AbstractNodeItem.`setAccessoryOrientation(Orientation accessoryOrientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	CompartmentItem.`setAccessoryOrientation(Orientation accessoryOrientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	PathwayItem.`setAccessoryOrientation(Orientation accessoryOrientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	AbstractEdgeItem.`setAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	AbstractNodeItem.`setAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	CompartmentItem.`setAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	PathwayItem.`setAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	Guideline.`setAngle(double angle)`
`void`	MetaboliteItem.`setBlur(double blur)`
`void`	Comment.`setBrush(Brush brush)`	Sets the fill brush of the item's shape.
`void`	Legend.`setBrush(Brush brush)`	Sets the fill brush of the item's shape.
`void`	AbstractNodeItem.`setCollapsed(boolean collapsed)`	Changes the collapsed-state of the item in the diagram.
`void`	Comment.`setDefaultBrush()`	Sets the fill brush of the item's shape to default.
`void`	AbstractNodeItem.`setDefaultCollapsed()`	Changes the collapsed-state of the item in the diagram.
`void`	Comment.`setDefaultFont()`	Changes the font of the text label of the item.
`void`	Comment.`setDefaultStrokeColor()`	Sets the color for the stroke of the item's shape.
`void`	Comment.`setDefaultStrokeStyle()`	Changes the paint style for the stroke of the item's shape.
`void`	Comment.`setDefaultStrokeWidth()`	Changes the stroke width of the item's shape.
`void`	Comment.`setDefaultTransparency()`	Changes the transparency of the item's shape to default.
`void`	AbstractEdgeItem.`setDockingPositions(DockingPosition srcPort, DockingPosition dstPort)`	Changes the docking positions of the edge at the source and destination nodes.
`void`	MetaboliteItem.`setFillLevel(double fillLevel)`
`void`	MetaboliteItem.`setFillLevelIndication(FillLevelIndication fillLevelIndication)`
`void`	Comment.`setFont(Font font)`	Changes the font of the text label of the item.
`void`	Legend.`setFont(Font font)`	Changes the font of the text label of the item.
`void`	MetaboliteItem.`setFont(Font font)`
`void`	Legend.`setHeadline(String text)`
`void`	Clipping.`setHeight(double height)`
`void`	AbstractNodeItem.`setHidden(boolean hidden)`	Changes the property hidden of the item.
`void`	Comment.`setHidden(boolean hidden)`	Changes the visibility of the item in the diagram.
`void`	CompartmentItem.`setHidden(boolean hidden)`
`void`	GraphicsBoxItem.`setHidden(boolean hidden)`
`void`	GraphicsPathItem.`setHidden(boolean hidden)`
`void`	Legend.`setHidden(boolean hidden)`	Changes the visibility of the item in the diagram.
`void`	Clipping.`setIdentifier(String identifier)`
`void`	Comment.`setIdentifier(String identifier)`	Changes identifier of the item.
`void`	Legend.`setIdentifier(String identifier)`	Changes identifier of the item.
`void`	AbstractNodeItem.`setLabelFloating(boolean floating)`	Changes the property floating of the item's label.
`void`	AbstractNodeItem.`setLabelHidden(boolean hidden)`	Changes the property hidden of the item's label.
`void`	AbstractNodeItem.`setLabelPlacement(NodeLabelPlacement labelPlacement)`	Changes the placement of the item's label.
`void`	AbstractNodeItem.`setLabelPosition(double labelX, double labelY)`	Changes the position of the item's label.
`void`	CompartmentItem.`setLabelPosition(double labelX, double labelY)`	Changes the position of the item's label.
`void`	PathwayItem.`setLabelPosition(double labelX, double labelY)`	Changes the position of the item's label.
`void`	AbstractNodeItem.`setLabelRotation(double labelRotation)`	Changes the rotation of the item's label.
`void`	CompartmentItem.`setLabelRotation(double labelRotation)`	Changes the rotation of the position of the item's label.
`void`	PathwayItem.`setLabelRotation(double labelRotation)`	Changes the rotation of the position of the item's label.
`void`	MetaboliteItem.`setPaint(Paint paint)`
`void`	AbstractEdgeItem.`setPoints(List<? extends AbstractCurvePoint> points)`
`default void`	AbstractEdgeItem.`setPoints(AbstractCurvePoint... points)`
`void`	GraphicsPathItem.`setPoints(List<? extends AbstractCurvePoint> points)`
`default void`	GraphicsPathItem.`setPoints(AbstractCurvePoint... points)`
`void`	AbstractNodeItem.`setPosition(double x, double y)`	Set the position of the item.
`void`	Comment.`setPosition(double x, double y)`	Set the position of the item.
`void`	CompartmentItem.`setPosition(double x, double y)`	Set the position of the item.
`void`	GraphicsBoxItem.`setPosition(double x, double y)`	Set the position of the item.
`void`	Guideline.`setPosition(double x, double y)`
`void`	Legend.`setPosition(double x, double y)`	Set the position of the item.
`void`	GraphicsBoxItem.`setRotation(double rotation)`	Change the rotation of the item.
`void`	MetaboliteItem.`setScale(double scale)`
`void`	MetaboliteItem.`setShadow(Shadow shadow)`
`void`	MetaboliteItem.`setShape(Shape shape)`
`void`	AbstractNodeItem.`setSize(double width, double height)`	Changes the item's size.
`void`	Comment.`setSize(double width, double height)`	Changes the item's size.
`void`	CompartmentItem.`setSize(double width, double height)`	Changes the item's size.
`void`	GraphicsBoxItem.`setSize(double width, double height)`	Changes the item's size.
`void`	Legend.`setSize(double width, double height)`	Changes the item's size.
`void`	Comment.`setStrokeColor(Color strokeColor)`	Sets the color for the stroke of the item's shape.
`void`	Legend.`setStrokeColor(Color strokeColor)`	Sets the color for the stroke of the item's shape.
`void`	MetaboliteItem.`setStrokeColor(Color strokeColor)`
`void`	Comment.`setStrokeStyle(StrokeStyle strokeStyle)`	Changes the paint style for the stroke of the item's shape.
`void`	Legend.`setStrokeStyle(StrokeStyle strokeStyle)`	Changes the paint style for the stroke of the item's shape.
`void`	MetaboliteItem.`setStrokeStyle(StrokeStyle strokeStyle)`
`void`	Comment.`setStrokeWidth(double strokeWidth)`	Changes the stroke width of the item's shape.
`void`	Legend.`setStrokeWidth(double strokeWidth)`	Changes the stroke width of the item's shape.
`void`	MetaboliteItem.`setStrokeWidth(double strokeWidth)`
`void`	Comment.`setText(String text)`
`void`	MetaboliteItem.`setTextBrush(Brush textBrush)`
`void`	MetaboliteItem.`setTextStrokeColor(Color textStrokeColor)`
`void`	MetaboliteItem.`setTextStrokeWidth(double textStrokeWidth)`
`void`	Comment.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	Legend.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	MetaboliteItem.`setTransparency(double transparency)`
`void`	Clipping.`setWidth(double width)`
`void`	Clipping.`setX(double x)`
`void`	Clipping.`setY(double y)`
`void`	AbstractNodeItem.`setZValue(double z)`	Change z value of the item (defines the stacked position of the item in the diagram).
`void`	Comment.`setZValue(double z)`	Change z layer of the item (defines the stacked position of the item in the diagram).
`void`	CompartmentItem.`setZValue(double z)`	Change z layer of the item (defines the stacked position of the item in the diagram).
`void`	GraphicsBoxItem.`setZValue(double z)`	Change z layer of the item (defines the stacked position of the item in the diagram).
`void`	GraphicsPathItem.`setZValue(double z)`	Change z layer of the item (defines the stacked position of the item in the diagram).
`void`	Legend.`setZValue(double z)`	Change z layer of the item (defines the stacked position of the item in the diagram).

Uses of IllegalChangeException in omix.plugin.diagram.writable.accessory

Methods in omix.plugin.diagram.writable.accessory that throw IllegalChangeException

Modifier and Type Method Description

void AccessoryItem.setVisible(boolean visible)

Methods in omix.plugin.diagram.writable.accessory that throw IllegalChangeException
Modifier and Type	Method	Description
`void`	AccessoryItem.`setVisible(boolean visible)`

Uses of IllegalChangeException in omix.plugin.diagram.writable.accessory.annotation

Methods in omix.plugin.diagram.writable.accessory.annotation that throw IllegalChangeException
Modifier and Type	Method	Description
`void`	AbstractSideBoxItem.`setPosition(double x, double y)`	Set the position of the item.
`void`	ImageFieldItem.`setPosition(double x, double y)`	Set the position of the item.
`void`	SideBoxItem.`setPosition(double x, double y)`	Set the position of the item.
`void`	SimpleValueFieldItem.`setPosition(double x, double y)`	Set the position of the item.
`void`	AbstractSideBoxItem.`setSize(double width, double height)`
`void`	AbstractSideBoxItem.`setSizeDefault()`

Uses of IllegalChangeException in omix.plugin.diagram.writable.pattern

Methods in omix.plugin.diagram.writable.pattern that throw IllegalChangeException
Modifier and Type	Method	Description
`void`	PatternPath.`setElements(List<Double> keys, List<? extends AbstractNodeItem> nodes, List<? extends AbstractEdgeItem> edges)`
`void`	PatternBranch.`setNode(AbstractNodeItem node)`

Uses of IllegalChangeException in omix.plugin.model.accessory.annotation

Methods in omix.plugin.model.accessory.annotation that throw IllegalChangeException
Modifier and Type	Method	Description
`void`	ItemGroup.`addModelComponent(AbstractModelComponent item)`	Add item to the item list.
`void`	ItemGroup.`removeModelComponent(AbstractModelComponent item)`	Remove item from the item list.
`void`	ItemGroup.`setModelComponents(Collection<? extends AbstractModelComponent> items)`	Exchange item list.

Uses of IllegalChangeException in omix.plugin.model.writable

Methods in omix.plugin.model.writable that throw IllegalChangeException
Modifier and Type	Method	Description
`CustomShape`	Model.`addCustomShape(String name, List<? extends AbstractCurvePoint> points)`	Creates a new custom shape available for nodes or edge markers.
`void`	Compartment.`addPublicIdentifier(PublicIdentifier publicIdentifier)`	Adds a public identifier to the item.
`void`	MetaboliteType.`addPublicIdentifier(PublicIdentifier publicIdentifier)`	Adds a public identifier to the item.
`void`	Model.`addPublicIdentifier(PublicIdentifier publicIdentifier)`	Adds a public identifier to the model.
`void`	Pathway.`addPublicIdentifier(PublicIdentifier publicIdentifier)`	Adds a public identifier to the item.
`void`	Reaction.`addPublicIdentifier(PublicIdentifier publicIdentifier)`	Adds a public identifier to the item.
`default void`	Compartment.`addSynonym(String synonym)`	Adds a synonym to the item.
`void`	Compartment.`addSynonym(String synonym, String htmlSynonym)`	Adds a synonym to the item.
`default void`	MetaboliteType.`addSynonym(String synonym)`	Adds a synonym to the item.
`void`	MetaboliteType.`addSynonym(String synonym, String htmlSynonym)`	Adds a synonym to the item.
`default void`	Pathway.`addSynonym(String synonym)`	Adds a synonym to the item.
`void`	Pathway.`addSynonym(String synonym, String htmlSynonym)`	Adds a synonym to the item.
`default void`	Reaction.`addSynonym(String synonym)`	Adds a synonym to the item.
`void`	Reaction.`addSynonym(String synonym, String htmlSynonym)`	Adds a synonym to the item.
`void`	Compartment.`exchangeSynonyms(int index1, int index2)`	Exchanges the position of two synonyms.
`void`	MetaboliteType.`exchangeSynonyms(int index1, int index2)`	Exchanges the position of two synonyms.
`void`	Pathway.`exchangeSynonyms(int index1, int index2)`	Exchanges the position of two synonyms.
`void`	Reaction.`exchangeSynonyms(int index1, int index2)`	Exchanges the position of two synonyms.
`void`	FluxEdge.`invert()`	Inverts the flux edge.
`void`	Reaction.`invert()`	Inverts all flux edges of the reaction.
`void`	Compartment.`removePublicIdentifier(PublicIdentifier publicIdentifier)`	Removes the public identifier from the item.
`void`	MetaboliteType.`removePublicIdentifier(PublicIdentifier publicIdentifier)`	Removes the public identifier from the item.
`void`	Model.`removePublicIdentifier(PublicIdentifier publicIdentifier)`	Removes the public identifier from the model.
`void`	Pathway.`removePublicIdentifier(PublicIdentifier publicIdentifier)`	Removes the public identifier from the item.
`void`	Reaction.`removePublicIdentifier(PublicIdentifier publicIdentifier)`	Removes the public identifier from the item.
`void`	Compartment.`removeSynonym(int synonymIndex)`	Removes the synonym from the item.
`void`	Compartment.`removeSynonym(String synonym)`	Removes the synonym from the item.
`void`	MetaboliteType.`removeSynonym(int synonymIndex)`	Removes the synonym from the item.
`void`	MetaboliteType.`removeSynonym(String synonym)`	Removes the synonym from the item.
`void`	Pathway.`removeSynonym(int synonymIndex)`	Removes the synonym from the item.
`void`	Pathway.`removeSynonym(String synonym)`	Removes the synonym from the item.
`void`	Reaction.`removeSynonym(int synonymIndex)`	Removes the synonym from the item.
`void`	Reaction.`removeSynonym(String synonym)`	Removes the synonym from the item.
`void`	EffectorEdge.`setActivationBrush(Brush value)`	Changes the paint brush that the effector edge shows as activation.
`void`	LinkEdge.EffectorEdgeAppearance.`setActivationBrush(Brush value)`	Changes the paint brush that the effector edge shows as activation.
`void`	EffectorEdge.`setActivationBrushDefault()`	Changes the paint brush that the effector edge shows as activation to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setActivationBrushDefault()`	Changes the paint brush that the effector edge shows as activation to default.
`void`	EffectorEdge.`setArrowSize(double arrowSize)`	Changes the arrow size.
`void`	FluxEdge.`setArrowSize(double arrowSize)`	Changes the arrow size.
`void`	LinkEdge.EffectorEdgeAppearance.`setArrowSize(double arrowSize)`	Changes the arrow size.
`void`	LinkEdge.FluxEdgeAppearance.`setArrowSize(double arrowSize)`	Changes the arrow size.
`void`	EffectorEdge.`setArrowSizeDefault()`	Changes the arrow size to default.
`void`	FluxEdge.`setArrowSizeDefault()`	Changes the arrow size to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setArrowSizeDefault()`	Changes the arrow size to default.
`void`	LinkEdge.FluxEdgeAppearance.`setArrowSizeDefault()`	Changes the arrow size to default.
`void`	AbstractNode.`setBlur(double blur)`	The blur of the node.
`void`	AbstractBioNode.`setBlurDefault()`	The blur of the node.
`void`	FluxEdge.`setBrush(Brush brush)`	Sets the fill brush of the item's shape.
`void`	GraphicsEdge.`setBrush(Brush brush)`	Sets the fill brush of the item's shape.
`void`	LinkEdge.FluxEdgeAppearance.`setBrush(Brush brush)`	Sets the fill brush of the item's shape.
`void`	LinkEdge.GraphicsEdgeAppearance.`setBrush(Brush brush)`	Sets the fill brush of the item's shape.
`void`	Pathway.`setBrush(Brush brush)`	Sets the fill brush of the item's shape.
`void`	Compartment.`setBrushDefault()`	Sets the fill brush of the item's shape to default.
`void`	FluxEdge.`setBrushDefault()`	Sets the fill brush of the item's shape to default.
`void`	LinkEdge.FluxEdgeAppearance.`setBrushDefault()`	Sets the fill brush of the item's shape to default.
`void`	Pathway.`setBrushDefault()`	Sets the fill brush of the item's shape to default.
`void`	FluxEdge.`setCoefficient(double coefficient)`	Changes the edge coefficient.
`void`	LinkEdge.FluxEdgeAppearance.`setCoefficient(double coefficient)`	Changes the edge coefficient.
`void`	FluxEdge.`setCoefficientBrush(Brush brush)`	Changes the brush of the edge's coefficient.
`void`	LinkEdge.FluxEdgeAppearance.`setCoefficientBrush(Brush brush)`	Changes the brush of the edge's coefficient.
`void`	FluxEdge.`setCoefficientBrushDefault()`	Changes the brush of the edge's coefficient to default.
`void`	LinkEdge.FluxEdgeAppearance.`setCoefficientBrushDefault()`	Changes the brush of the edge's coefficient to default.
`void`	FluxEdge.`setCoefficientFont(Font font)`	Changes the font of the edge's coefficient.
`void`	LinkEdge.FluxEdgeAppearance.`setCoefficientFont(Font font)`	Changes the font of the edge's coefficient.
`void`	FluxEdge.`setCoefficientFontDefault()`	Changes the font of the edge's coefficient to default.
`void`	LinkEdge.FluxEdgeAppearance.`setCoefficientFontDefault()`	Changes the font of the edge's coefficient to default.
`void`	StyleSheet.`setCoefficientsHidden(boolean hidden)`
`void`	FluxEdge.`setCofactor(boolean isCofactor)`	Changes the cofactor state of the edge.
`void`	LinkEdge.FluxEdgeAppearance.`setCofactor(boolean isCofactor)`	Changes the cofactor state of the edge.
`void`	StyleSheet.`setCofactorEdgeAccessoryAnchorFloating(double accessoryAnchorFloating)`	Changes the floating state of the item's accessory anchor.
`void`	StyleSheet.`setCofactorEdgeAccessoryAnchorFloatingDefault()`
`void`	StyleSheet.`setCofactorEdgeAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	StyleSheet.`setCofactorEdgeAccessoryAnchorPlacementDefault()`
`void`	StyleSheet.`setCofactorEdgeAccessoryFloating(boolean accessoryFloating)`	Changes the floating state of the item's accessories.
`void`	StyleSheet.`setCofactorEdgeAccessoryFloatingDefault()`
`void`	StyleSheet.`setCofactorEdgeAccessoryOrientation(Orientation orientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	StyleSheet.`setCofactorEdgeAccessoryOrientationDefault()`
`void`	StyleSheet.`setCofactorEdgeAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	StyleSheet.`setCofactorEdgeAccessorySpacingDefault()`
`void`	StyleSheet.`setCofactorEdgeArrowSize(double arrowSize)`	Changes the arrow size.
`void`	StyleSheet.`setCofactorEdgeArrowSizeDefault()`	Changes the cofactor edges' default arrow size to application's default value.
`void`	StyleSheet.`setCofactorEdgeBrush(Brush brush)`	Sets the fill brush of the cofactor edges' default shape.
`void`	StyleSheet.`setCofactorEdgeBrushDefault()`	Sets the fill brush of the cofactor edges' default shape to application's default value.
`void`	StyleSheet.`setCofactorEdgeCoefficientBrush(Brush brush)`	Changes the brush of the edge's coefficient.
`void`	StyleSheet.`setCofactorEdgeCoefficientBrushDefault()`	Changes the brush of the edge's coefficient to application's default value.
`void`	StyleSheet.`setCofactorEdgeCoefficientDecimalFormat(DecimalFormat cofactorEdgeCoefficientDecimalFormat)`
`void`	StyleSheet.`setCofactorEdgeCoefficientDecimalFormatDefault()`
`void`	StyleSheet.`setCofactorEdgeCoefficientFont(Font font)`	Changes the font of the edge's coefficient.
`void`	StyleSheet.`setCofactorEdgeCoefficientFontDefault()`	Changes the font of the edge's coefficient to application's default value.
`void`	StyleSheet.`setCofactorEdgeLineStyle(StrokeStyle lineStyle)`
`void`	StyleSheet.`setCofactorEdgeLineStyleDefault()`	Changes the line style of the edge to application's default value.
`void`	StyleSheet.`setCofactorEdgeLineWidth(double lineWidth)`
`void`	StyleSheet.`setCofactorEdgeLineWidthDefault()`	Changes the line width of the edge to application's default value.
`void`	StyleSheet.`setCofactorEdgeReversibilitySignBrush(Brush brush)`	Changes the brush of the reversibility sign (if available).
`void`	StyleSheet.`setCofactorEdgeReversibilitySignBrushDefault()`	Changes the cofactor edges' default brush of the reversibility sign (if available) to application's default value.
`void`	StyleSheet.`setCofactorEdgeReversibilitySignScale(double size)`	Changes the scale of the reversibility sign (if available).
`void`	StyleSheet.`setCofactorEdgeReversibilitySignScaleDefault()`	Changes the cofactor edges' default scale of the reversibility sign (if available) to application's default value.
`void`	StyleSheet.`setCofactorEdgeShadow(Shadow shadow)`
`void`	StyleSheet.`setCofactorEdgeShadowDefault()`	Sets the cofactor edges' default shadow to application's default value.
`void`	StyleSheet.`setCofactorEdgeStrokeColor(Color strokeColor)`
`void`	StyleSheet.`setCofactorEdgeStrokeColorDefault()`	Sets the color for the stroke of the cofactor edges' default shape to application's default value.
`void`	StyleSheet.`setCofactorEdgeStrokeStyle(StrokeStyle strokeStyle)`
`void`	StyleSheet.`setCofactorEdgeStrokeStyleDefault()`	Changes the paint style for the stroke of the cofactor edges' default shape to application's default value.
`void`	StyleSheet.`setCofactorEdgeStrokeWidth(double strokeWidth)`
`void`	StyleSheet.`setCofactorEdgeStrokeWidthDefault()`	Changes the stroke width of the cofactor edges' default shape to application's default value.
`void`	StyleSheet.`setCofactorEdgeTransparency(double transparency)`
`void`	StyleSheet.`setCofactorEdgeTransparencyDefault()`	Changes the transparency of the cofactor edges' default shape to application's default value.
`void`	StyleSheet.`setCofactorsHidden(boolean hidden)`
`void`	AbstractNode.`setCollapsed(boolean collapsed)`
`void`	AbstractBioNode.`setCollapsedDefault()`
`void`	StyleSheet.`setCommentBlur(double commentBlur)`
`void`	StyleSheet.`setCommentBlurDefault()`
`void`	StyleSheet.`setCommentBrush(Brush commentBrush)`
`void`	StyleSheet.`setCommentBrushDefault()`
`void`	StyleSheet.`setCommentFont(Font commentFont)`
`void`	StyleSheet.`setCommentFontDefault()`
`void`	StyleSheet.`setCommentScale(double commentScale)`
`void`	StyleSheet.`setCommentScaleDefault()`
`void`	StyleSheet.`setCommentShadow(Shadow commentShadow)`
`void`	StyleSheet.`setCommentShadowDefault()`
`void`	StyleSheet.`setCommentsHidden(boolean hidden)`
`void`	StyleSheet.`setCommentStrokeColor(Color commentStrokeColor)`
`void`	StyleSheet.`setCommentStrokeColorDefault()`
`void`	StyleSheet.`setCommentStrokeStyle(StrokeStyle commentStrokeStyle)`
`void`	StyleSheet.`setCommentStrokeStyleDefault()`
`void`	StyleSheet.`setCommentStrokeWidth(double commentStrokeWidth)`
`void`	StyleSheet.`setCommentStrokeWidthDefault()`
`void`	StyleSheet.`setCommentTransparency(double commentTransparency)`
`void`	StyleSheet.`setCommentTransparencyDefault()`
`void`	StyleSheet.`setCompartmentAccessoryAnchorFloating(double accessoryAnchorFloating)`	Changes the floating state of the item's accessory anchor.
`void`	StyleSheet.`setCompartmentAccessoryAnchorFloatingDefault()`
`void`	StyleSheet.`setCompartmentAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	StyleSheet.`setCompartmentAccessoryAnchorPlacementDefault()`
`void`	StyleSheet.`setCompartmentAccessoryFloating(boolean accessoryFloating)`	Changes the floating state of the item's accessories.
`void`	StyleSheet.`setCompartmentAccessoryFloatingDefault()`
`void`	StyleSheet.`setCompartmentAccessoryOrientation(Orientation orientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	StyleSheet.`setCompartmentAccessoryOrientationDefault()`
`void`	StyleSheet.`setCompartmentAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	StyleSheet.`setCompartmentAccessorySpacingDefault()`
`void`	StyleSheet.`setCompartmentFont(Font font)`	Changes the default font of the compartments' text label.
`void`	StyleSheet.`setCompartmentFontDefault()`	Changes the font of the text label of the item to application's default value.
`void`	StyleSheet.`setCompartmentLabelConfiguration(LabelConfiguration configuration)`
`void`	StyleSheet.`setCompartmentLabelHidden(boolean hidden)`
`void`	StyleSheet.`setCompartmentPaint(Paint paint)`	Sets the fill brush of the item's shape.
`void`	StyleSheet.`setCompartmentPaintDefault()`
`void`	StyleSheet.`setCompartmentShape(Shape shape)`	Sets the compartments' default shape.
`void`	StyleSheet.`setCompartmentShapeDefault()`	Sets the compartments' default shape to application's default value.
`void`	StyleSheet.`setCompartmentsHidden(boolean hidden)`
`void`	StyleSheet.`setCompartmentStrokeColor(Color strokeColor)`	Changes the color for the stroke of the compartments' default shape.
`void`	StyleSheet.`setCompartmentStrokeColorDefault()`	Changes the color for the stroke of the compartments' default shape to application's default value.
`void`	StyleSheet.`setCompartmentStrokeStyle(StrokeStyle strokeStyle)`	Changes the paint style for the stroke of the compartments' default shape.
`void`	StyleSheet.`setCompartmentStrokeStyleDefault()`	Changes the paint style for the stroke of the compartments' default shape to application's default value.
`void`	StyleSheet.`setCompartmentStrokeWidth(double strokeWidth)`	Changes the stroke width of the compartments' default shape.
`void`	StyleSheet.`setCompartmentStrokeWidthDefault()`	Changes the stroke width of the compartments' default shape to application's default value.
`void`	StyleSheet.`setCompartmentTextBrush(Brush textBrush)`	Changes the fill brush of the compartments' default text label.
`void`	StyleSheet.`setCompartmentTextBrushDefault()`	Changes the fill brush of the compartments' default text label to application's default value.
`void`	StyleSheet.`setCompartmentTextStrokeColor(Color textStrokeColor)`	Changes the color for the stroke of the compartments' default text label.
`void`	StyleSheet.`setCompartmentTextStrokeColorDefault()`	Changes the color for the stroke of the compartments' default text label to application's default value.
`void`	StyleSheet.`setCompartmentTextStrokeWidth(double textStrokeWidth)`	Changes the stroke width of the compartments' default text label.
`void`	StyleSheet.`setCompartmentTextStrokeWidthDefault()`	Changes the stroke width of the compartments' default text label to application's default value.
`void`	StyleSheet.`setCompartmentTransparency(double transparency)`	Changes the transparency of the compartments' default shape.
`void`	StyleSheet.`setCompartmentTransparencyDefault()`	Changes the transparency of the compartments' default shape to application's default value.
`void`	EffectorEdge.`setEffect(double effect)`	Changes the edge's effect value.
`void`	LinkEdge.EffectorEdgeAppearance.`setEffect(double effect)`	Changes the edge's effect value.
`void`	StyleSheet.`setEffectorEdgeAccessoryAnchorFloating(double accessoryAnchorFloating)`	Changes the floating state of the item's accessory anchor.
`void`	StyleSheet.`setEffectorEdgeAccessoryAnchorFloatingDefault()`
`void`	StyleSheet.`setEffectorEdgeAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	StyleSheet.`setEffectorEdgeAccessoryAnchorPlacementDefault()`
`void`	StyleSheet.`setEffectorEdgeAccessoryFloating(boolean accessoryFloating)`	Changes the floating state of the item's accessories.
`void`	StyleSheet.`setEffectorEdgeAccessoryFloatingDefault()`
`void`	StyleSheet.`setEffectorEdgeAccessoryOrientation(Orientation orientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	StyleSheet.`setEffectorEdgeAccessoryOrientationDefault()`
`void`	StyleSheet.`setEffectorEdgeAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	StyleSheet.`setEffectorEdgeAccessorySpacingDefault()`
`void`	StyleSheet.`setEffectorEdgeActivationBrush(Brush value)`	Changes the paint brush that the effector edge shows as activation.
`void`	StyleSheet.`setEffectorEdgeActivationBrushDefault()`	Changes the paint brush that the effector edge shows as activation to application's default value.
`void`	StyleSheet.`setEffectorEdgeArrowSize(double arrowSize)`	Changes the arrow size.
`void`	StyleSheet.`setEffectorEdgeArrowSizeDefault()`	Changes the arrow size to application's default value.
`void`	StyleSheet.`setEffectorEdgeInhibitionBrush(Brush value)`	Changes the paint brush that the effector edge shows as inhibition.
`void`	StyleSheet.`setEffectorEdgeInhibitionBrushDefault()`	Changes the paint brush that the effector edge shows as inhibition to application's default value.
`void`	StyleSheet.`setEffectorEdgeLineStyle(StrokeStyle lineStyle)`
`void`	StyleSheet.`setEffectorEdgeLineStyleDefault()`	Changes the line style of the edge to application's default value.
`void`	StyleSheet.`setEffectorEdgeLineWidth(double lineWidth)`
`void`	StyleSheet.`setEffectorEdgeLineWidthDefault()`	Changes the line width of the edge to application's default value.
`void`	StyleSheet.`setEffectorEdgeShadow(Shadow shadow)`
`void`	StyleSheet.`setEffectorEdgeShadowDefault()`	Sets the shadow of the edge to application's default value.
`void`	StyleSheet.`setEffectorEdgesHidden(boolean hidden)`
`void`	StyleSheet.`setEffectorEdgeStrokeColor(Color color)`
`void`	StyleSheet.`setEffectorEdgeStrokeColorDefault()`	Sets the color for the stroke of the item's shape to application's default value.
`void`	StyleSheet.`setEffectorEdgeStrokeStyle(StrokeStyle strokeStyle)`
`void`	StyleSheet.`setEffectorEdgeStrokeStyleDefault()`	Changes the paint style for the stroke of the item's shape to application's default value.
`void`	StyleSheet.`setEffectorEdgeStrokeWidth(double width)`
`void`	StyleSheet.`setEffectorEdgeStrokeWidthDefault()`	Changes the stroke width of the item's shape to application's default value.
`void`	StyleSheet.`setEffectorEdgeTransparency(double transparent)`
`void`	StyleSheet.`setEffectorEdgeTransparencyDefault()`	Changes the transparency of the item's shape to application's default value.
`void`	StyleSheet.`setEffectorEdgeUnknownEffectBrush(Brush value)`	Changes the paint brush that the effector edge shows as unknown effect.
`void`	StyleSheet.`setEffectorEdgeUnknownEffectBrushDefault()`	Changes the paint brush that the effector edge shows as unknown effect to application's default value.
`void`	GraphicsEdge.`setEndMarker(MarkerShape endMarker)`	Changes the shape of the end marker.
`void`	LinkEdge.GraphicsEdgeAppearance.`setEndMarker(MarkerShape endMarker)`	Changes the shape of the end marker.
`void`	GraphicsEdge.`setEndMarkerSize(double endMarkerSize)`	Changes the size of the end marker.
`void`	LinkEdge.GraphicsEdgeAppearance.`setEndMarkerSize(double endMarkerSize)`	Changes the size of the end marker.
`void`	AbstractNode.`setFillLevel(double fillLevel)`	The filling level of the item's shape given as percentage value.
`void`	AbstractBioNode.`setFillLevelDefault()`	Changes the fill level of the item's shape to default value.
`void`	AbstractNode.`setFillLevelIndication(FillLevelIndication fillLevelIndication)`	The indication for filling of the item's shape.
`void`	AbstractBioNode.`setFillLevelIndicationDefault()`	Changes the indication for filling of the item's shape to default.
`void`	GraphicsPath.`setFillPaint(Paint paint)`	Sets the fill appearance of the item's shape.
`void`	StyleSheet.`setFluxEdgeAccessoryAnchorFloating(double accessoryAnchorFloating)`	Changes the floating state of the item's accessory anchor.
`void`	StyleSheet.`setFluxEdgeAccessoryAnchorFloatingDefault()`
`void`	StyleSheet.`setFluxEdgeAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	StyleSheet.`setFluxEdgeAccessoryAnchorPlacementDefault()`
`void`	StyleSheet.`setFluxEdgeAccessoryFloating(boolean accessoryFloating)`	Changes the floating state of the item's accessory anchor.
`void`	StyleSheet.`setFluxEdgeAccessoryFloatingDefault()`
`void`	StyleSheet.`setFluxEdgeAccessoryOrientation(Orientation orientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	StyleSheet.`setFluxEdgeAccessoryOrientationDefault()`
`void`	StyleSheet.`setFluxEdgeAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	StyleSheet.`setFluxEdgeAccessorySpacingDefault()`
`void`	StyleSheet.`setFluxEdgeArrowSize(double arrowSize)`	Changes the arrow size.
`void`	StyleSheet.`setFluxEdgeArrowSizeDefault()`	Changes the flux edges' default arrow size to application's default value.
`void`	StyleSheet.`setFluxEdgeBrush(Brush brush)`	Sets the fill brush of the flux edges' default shape.
`void`	StyleSheet.`setFluxEdgeBrushDefault()`	Sets the fill brush of the flux edges' default shape to application's default value.
`void`	StyleSheet.`setFluxEdgeCoefficientBrush(Brush brush)`	Changes the brush of the edge's coefficient.
`void`	StyleSheet.`setFluxEdgeCoefficientBrushDefault()`	Changes the brush of the edge's coefficient to application's default value.
`void`	StyleSheet.`setFluxEdgeCoefficientFont(Font font)`	Changes the font of the edge's coefficient.
`void`	StyleSheet.`setFluxEdgeCoefficientFontDefault()`	Changes the font of the edge's coefficient to application's default value.
`void`	StyleSheet.`setFluxEdgeLineStyle(StrokeStyle lineStyle)`
`void`	StyleSheet.`setFluxEdgeLineStyleDefault()`	Changes the line style of the edge to application's default value.
`void`	StyleSheet.`setFluxEdgeLineWidth(double lineWidth)`	Changes the line width of the edge.
`void`	StyleSheet.`setFluxEdgeLineWidthDefault()`	Changes the line width of the edge to application's default value.
`void`	StyleSheet.`setFluxEdgeReversibilitySignBrush(Brush brush)`	Changes the brush of the reversibility sign (if available).
`void`	StyleSheet.`setFluxEdgeReversibilitySignBrushDefault()`	Changes the flux edges' default brush of the reversibility sign (if available) to application's default value.
`void`	StyleSheet.`setFluxEdgeReversibilitySignScale(double size)`	Changes the scale of the reversibility sign (if available).
`void`	StyleSheet.`setFluxEdgeReversibilitySignScaleDefault()`	Changes the flux edges' default scale of the reversibility sign (if available) to application's default value.
`void`	StyleSheet.`setFluxEdgeShadow(Shadow shadow)`
`void`	StyleSheet.`setFluxEdgeShadowDefault()`	Sets the flux edges' default shadow to application's default value.
`void`	StyleSheet.`setFluxEdgesHidden(boolean hidden)`
`void`	StyleSheet.`setFluxEdgeStrokeColor(Color strokeColor)`
`void`	StyleSheet.`setFluxEdgeStrokeColorDefault()`	Sets the color for the stroke of the flux edges' default shape to application's default value.
`void`	StyleSheet.`setFluxEdgeStrokeStyle(StrokeStyle strokeStyle)`
`void`	StyleSheet.`setFluxEdgeStrokeStyleDefault()`	Changes the paint style for the stroke of the flux edges' default shape to application's default value.
`void`	StyleSheet.`setFluxEdgeStrokeWidth(double strokeWidth)`
`void`	StyleSheet.`setFluxEdgeStrokeWidthDefault()`	Changes the stroke width of the flux edges' default shape to application's default value.
`void`	StyleSheet.`setFluxEdgeTransparency(double transparency)`
`void`	StyleSheet.`setFluxEdgeTransparencyDefault()`	Changes the transparency of the flux edges' default shape to application's default value.
`void`	AbstractNode.`setFont(Font font)`	The font of the text label of the item.
`void`	Compartment.`setFont(Font font)`	Changes the font of the text label of the item.
`void`	GraphicsBox.`setFont(Font font)`	Changes the font of the text label of the item.
`void`	Pathway.`setFont(Font font)`	Changes the font of the text label of the item.
`void`	AbstractBioNode.`setFontDefault()`	Changes the font of the text label of the item to default.
`void`	Compartment.`setFontDefault()`	Changes the font of the text label of the item.
`void`	Pathway.`setFontDefault()`	Changes the font of the text label of the item to default.
`void`	Compartment.`setFormattedLabel(String html)`	Set items visible label in html.
`void`	MetaboliteType.`setFormattedLabel(String html)`	Set items visible label in html.
`void`	Pathway.`setFormattedLabel(String html)`	Set items visible label in html.
`void`	Reaction.`setFormattedLabel(String html)`	Set items visible label in html.
`void`	StyleSheet.`setGraphicsEdgesHidden(boolean hidden)`
`void`	StyleSheet.`setGraphicsItemsHidden(boolean hidden)`
`void`	StyleSheet.`setGraphicsNodeCollapsed(boolean collapsed)`	Changes the default value of all graphics nodes' collapsed-state in the diagram.
`void`	StyleSheet.`setGraphicsNodeLabelFloating(boolean floating)`
`void`	StyleSheet.`setGraphicsNodeLabelHidden(boolean hidden)`
`void`	StyleSheet.`setGraphicsNodeLabelPlacement(NodeLabelPlacement placement)`
`void`	AbstractNode.`setHidden(boolean hidden)`	Changes the visibility of the item in the diagram.
`void`	Compartment.`setHidden(boolean hidden)`	Changes the visibility of the item in the diagram.
`void`	GraphicsBox.`setHidden(boolean hidden)`	Changes the visibility of the item in the diagram.
`void`	GraphicsPath.`setHidden(boolean hidden)`	Changes the visibility of the item in the diagram.
`void`	Pathway.`setHidden(boolean hidden)`	Changes the visibility of the item in the diagram.
`void`	Compartment.`setIdentifier(String identifier)`	Changes identifier of the item.
`void`	GraphicsBox.`setIdentifier(String identifier)`	Changes identifier of the item.
`void`	GraphicsNode.`setIdentifier(String identifier)`
`void`	GraphicsPath.`setIdentifier(String identifier)`	Changes identifier of the item.
`void`	Link.`setIdentifier(String identifier)`
`void`	MetaboliteType.`setIdentifier(String identifier)`	Changes identifier of the item.
`void`	Pathway.`setIdentifier(String identifier)`	Changes identifier of the item.
`void`	Reaction.`setIdentifier(String identifier)`	Changes identifier of the item.
`void`	EffectorEdge.`setInhibitionBrush(Brush value)`	Changes the paint brush that the effector edge shows as inhibition.
`void`	LinkEdge.EffectorEdgeAppearance.`setInhibitionBrush(Brush value)`	Changes the paint brush that the effector edge shows as inhibition.
`void`	EffectorEdge.`setInhibitionBrushDefault()`	Changes the paint brush that the effector edge shows as inhibition to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setInhibitionBrushDefault()`	Changes the paint brush that the effector edge shows as inhibition to default.
`void`	Reaction.`setInverted(boolean inverted)`	Changes the inverted state of the reaction.
`void`	GraphicsPath.`setLineBrush(Brush lineBrush)`	Sets the color for the stroke of the item's shape.
`void`	AbstractEdge.`setLineStyle(StrokeStyle lineStyle)`	Changes the line style of the edge.
`void`	GraphicsPath.`setLineStyle(StrokeStyle lineStyle)`	Changes the paint style for the stroke of the item's shape.
`void`	EffectorEdge.`setLineStyleDefault()`	Changes the line style of the edge to default.
`void`	FluxEdge.`setLineStyleDefault()`	Changes the line style of the edge to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setLineStyleDefault()`	Changes the line style of the edge to default.
`void`	LinkEdge.FluxEdgeAppearance.`setLineStyleDefault()`	Changes the line style of the edge to default.
`void`	AbstractEdge.`setLineWidth(double lineWidth)`	Changes the line width of the edge.
`void`	GraphicsPath.`setLineWidth(double lineWidth)`	Changes the line width of the item's shape.
`void`	EffectorEdge.`setLineWidthDefault()`	Changes the line width of the edge to default.
`void`	FluxEdge.`setLineWidthDefault()`	Changes the line width of the edge to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setLineWidthDefault()`	Changes the line width of the edge to default.
`void`	LinkEdge.FluxEdgeAppearance.`setLineWidthDefault()`	Changes the line width of the edge to default.
`void`	StyleSheet.`setLinkCollapsed(boolean collapsed)`	Changes the default value of all links' collapsed-state in the diagram.
`void`	StyleSheet.`setLinkLabelFloating(boolean floating)`
`void`	StyleSheet.`setLinkLabelHidden(boolean hidden)`
`void`	StyleSheet.`setLinkLabelPlacement(NodeLabelPlacement placement)`
`void`	Reaction.`setLocalPathwayStrength(double localPathwayStrength)`	Changes the local pathway strength of the reaction.
`void`	StyleSheet.`setMetaboliteAccessoryAnchorFloating(double accessoryAnchorFloating)`	Changes the floating state of the item's accessory anchor.
`void`	StyleSheet.`setMetaboliteAccessoryAnchorFloatingDefault()`
`void`	StyleSheet.`setMetaboliteAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	StyleSheet.`setMetaboliteAccessoryAnchorPlacementDefault()`
`void`	StyleSheet.`setMetaboliteAccessoryFloating(boolean accessoryFloating)`	Changes the floating state of the item's accessories.
`void`	StyleSheet.`setMetaboliteAccessoryFloatingDefault()`
`void`	StyleSheet.`setMetaboliteAccessoryOrientation(Orientation orientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	StyleSheet.`setMetaboliteAccessoryOrientationDefault()`
`void`	StyleSheet.`setMetaboliteAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	StyleSheet.`setMetaboliteAccessorySpacingDefault()`
`void`	StyleSheet.`setMetaboliteCollapsed(boolean collapsed)`	Changes the default value of all metabolites' collapsed-state in the diagram.
`void`	StyleSheet.`setMetaboliteFillLevel(double fillLevel)`	Changes the default value for metabolites' fill level.
`void`	StyleSheet.`setMetaboliteFillLevelDefault()`	Changes the default value for metabolites' fill level to application's default value.
`void`	StyleSheet.`setMetaboliteFillLevelIndication(FillLevelIndication fillLevelIndication)`	Changes the default value for metabolites' fill level Indication.
`void`	StyleSheet.`setMetaboliteFillLevelIndicationDefault()`	Changes the default value for metabolites' fill level Indication to application's default value.
`void`	StyleSheet.`setMetaboliteFont(Font font)`	Changes the default font for metabolites' default text labels.
`void`	StyleSheet.`setMetaboliteFontDefault()`	Changes the default font for metabolites' default text labels to application's default value.
`void`	StyleSheet.`setMetaboliteLabelConfiguration(LabelConfiguration configuration)`
`void`	StyleSheet.`setMetaboliteLabelFloating(boolean floating)`
`void`	StyleSheet.`setMetaboliteLabelHidden(boolean hidden)`
`void`	StyleSheet.`setMetaboliteLabelPlacement(NodeLabelPlacement placement)`
`void`	StyleSheet.`setMetabolitePaint(Paint paint)`	Changes the default value for the metabolites' default paint.
`void`	StyleSheet.`setMetabolitePaintDefault()`	Changes the default value for the metabolites' default paint to application's default value.
`void`	StyleSheet.`setMetaboliteScale(double scale)`	Changes the default value for metabolites' scale.
`void`	StyleSheet.`setMetaboliteScaleDefault()`	Changes the default value for metabolites' scale to application's default value.
`void`	StyleSheet.`setMetaboliteShadow(Shadow shadow)`	Changes the default value for the metabolites' default shadow.
`void`	StyleSheet.`setMetaboliteShadowDefault()`	Changes the default value for the metabolites' default shadow to application's default value.
`void`	StyleSheet.`setMetaboliteShape(Shape shape)`	Changes the default value for the metabolites' default shape.
`void`	StyleSheet.`setMetaboliteShapeDefault()`	Changes the default value for the metabolites' default shape to application's default value.
`void`	StyleSheet.`setMetaboliteStrokeColor(Color strokeColor)`	Changes the default value for the metabolites' default stroke color.
`void`	StyleSheet.`setMetaboliteStrokeColorDefault()`	Changes the default value for the metabolites' default stroke color to application's default value.
`void`	StyleSheet.`setMetaboliteStrokeStyle(StrokeStyle strokeStyle)`	Changes the default value for the metabolites' default stroke style.
`void`	StyleSheet.`setMetaboliteStrokeStyleDefault()`	Changes the default value for the metabolites' default stroke style to application's default value.
`void`	StyleSheet.`setMetaboliteStrokeWidth(double strokeWidth)`	Changes the default value for the metabolites' default stroke width.
`void`	StyleSheet.`setMetaboliteStrokeWidthDefault()`	Changes the default value for the metabolites' default stroke width to application's default value.
`void`	StyleSheet.`setMetaboliteTextBrush(Brush textBrush)`	Changes the default value for the metabolites' default text paint brush.
`void`	StyleSheet.`setMetaboliteTextBrushDefault()`	Changes the default value for the metabolites' default text paint brush to application's default value.
`void`	StyleSheet.`setMetaboliteTextStrokeColor(Color textStrokeColor)`	Changes the default value for the metabolites' default text stroke color.
`void`	StyleSheet.`setMetaboliteTextStrokeColorDefault()`	Changes the default value for the metabolites' default text stroke color to application's default value.
`void`	StyleSheet.`setMetaboliteTextStrokeWidth(double textStrokeWidth)`	Changes the default value for the metabolites' default text stroke width.
`void`	StyleSheet.`setMetaboliteTextStrokeWidthDefault()`	Changes the default value for the metabolites' default text stroke width to application's default value.
`void`	Model.`setName(String name)`	Changes name of the model.
`void`	AbstractNode.`setPaint(Paint paint)`	Sets the fill appearance of the item's shape.
`void`	Compartment.`setPaint(Paint paint)`	Sets the fill brush of the item's shape.
`void`	GraphicsBox.`setPaint(Paint paint)`	Sets the fill appearance of the item's shape.
`void`	AbstractBioNode.`setPaintDefault()`	Sets the fill appearance of the item's shape to default.
`void`	StyleSheet.`setPathwayAccessoryAnchorFloating(double accessoryAnchorFloating)`	Changes the floating state of the item's accessory anchor.
`void`	StyleSheet.`setPathwayAccessoryAnchorFloatingDefault()`
`void`	StyleSheet.`setPathwayAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	StyleSheet.`setPathwayAccessoryAnchorPlacementDefault()`
`void`	StyleSheet.`setPathwayAccessoryFloating(boolean accessoryFloating)`	Changes the floating state of the item's accessories.
`void`	StyleSheet.`setPathwayAccessoryFloatingDefault()`
`void`	StyleSheet.`setPathwayAccessoryOrientation(Orientation orientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	StyleSheet.`setPathwayAccessoryOrientationDefault()`
`void`	StyleSheet.`setPathwayAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	StyleSheet.`setPathwayAccessorySpacingDefault()`
`void`	StyleSheet.`setPathwayBrush(Brush brush)`	Sets the fill brush of the pathways' default shape.
`void`	StyleSheet.`setPathwayBrushDefault()`	Sets the fill brush of the pathways' default shape to application's default value.
`void`	StyleSheet.`setPathwayFont(Font font)`	Changes the font of the text label of the item.
`void`	StyleSheet.`setPathwayFontDefault()`	Changes the font of the text label of the item to application's default value.
`void`	StyleSheet.`setPathwayLabelConfiguration(LabelConfiguration configuration)`
`void`	StyleSheet.`setPathwayLabelHidden(boolean hidden)`
`void`	StyleSheet.`setPathwaysHidden(boolean hidden)`
`void`	StyleSheet.`setPathwayStrength(double strength)`	Changes the strength of the contour the pathway paints around its reactions and edges.
`void`	StyleSheet.`setPathwayStrengthDefault()`	Changes the strength of the contour the pathway paints around its reactions and edges to application's default value.
`void`	StyleSheet.`setPathwayStrokeColor(Color strokeColor)`	Changes the color for the stroke of the pathways' default shape.
`void`	StyleSheet.`setPathwayStrokeColorDefault()`	Changes the color for the stroke of the pathways' default shape to application's default value.
`void`	StyleSheet.`setPathwayStrokeStyle(StrokeStyle strokeStyle)`	Changes the paint style for the stroke of the pathways' default shape.
`void`	StyleSheet.`setPathwayStrokeStyleDefault()`	Changes the paint style for the stroke of the pathways' default shape to application's default value.
`void`	StyleSheet.`setPathwayStrokeWidth(double strokeWidth)`	Changes the stroke width of the pathways' default shape.
`void`	StyleSheet.`setPathwayStrokeWidthDefault()`	Changes the stroke width of the pathways' default shape to application's default value.
`void`	StyleSheet.`setPathwayTextBrush(Brush textBrush)`	Changes the fill brush of the pathways' default text label.
`void`	StyleSheet.`setPathwayTextBrushDefault()`	Changes the fill brush of the pathways' default text label to application's default value.
`void`	StyleSheet.`setPathwayTextStrokeColor(Color textStrokeColor)`	Changes the color for the stroke of the pathways' default text label.
`void`	StyleSheet.`setPathwayTextStrokeColorDefault()`	Changes the color for the stroke of the pathways' default text label to application's default value.
`void`	StyleSheet.`setPathwayTextStrokeWidth(double textStrokeWidth)`	Changes the stroke width of the pathways' default text label.
`void`	StyleSheet.`setPathwayTextStrokeWidthDefault()`	Changes the stroke width of the pathways' default text label to application's default value.
`void`	StyleSheet.`setPathwayTransparency(double transparency)`	Changes the transparency of the pathways' default shape.
`void`	StyleSheet.`setPathwayTransparencyDefault()`	Changes the transparency of the pathways' default shape to application's default value.
`void`	Compartment.`setPublicIdentifiers(Collection<? extends PublicIdentifier> publicIdentifiers)`	Set the public identifiers of the item.
`void`	MetaboliteType.`setPublicIdentifiers(Collection<? extends PublicIdentifier> publicIdentifiers)`	Set the public identifiers of the item.
`void`	Model.`setPublicIdentifiers(Collection<? extends PublicIdentifier> publicIdentifiers)`	Set the public identifiers of the model.
`void`	Pathway.`setPublicIdentifiers(Collection<? extends PublicIdentifier> publicIdentifiers)`	Set the public identifiers of the item.
`void`	Reaction.`setPublicIdentifiers(Collection<? extends PublicIdentifier> publicIdentifiers)`	Set the public identifiers of the item.
`void`	StyleSheet.`setReactionAccessoryAnchorFloating(double accessoryAnchorFloating)`	Changes the floating state of the item's accessory anchor.
`void`	StyleSheet.`setReactionAccessoryAnchorFloatingDefault()`
`void`	StyleSheet.`setReactionAccessoryAnchorPlacement(AccessoryAnchorPlacement accessoryAnchorPlacement)`	Changes the placement of the item's accessory anchor.
`void`	StyleSheet.`setReactionAccessoryAnchorPlacementDefault()`
`void`	StyleSheet.`setReactionAccessoryFloating(boolean accessoryFloating)`	Changes the floating state of the item's accessories.
`void`	StyleSheet.`setReactionAccessoryFloatingDefault()`
`void`	StyleSheet.`setReactionAccessoryOrientation(Orientation orientation)`	Changes the layout (horizontal / vertical) of the item's accessory anchor.
`void`	StyleSheet.`setReactionAccessoryOrientationDefault()`
`void`	StyleSheet.`setReactionAccessorySpacing(double accessorySpacing)`	Changes the spacing of the item's accessory anchor.
`void`	StyleSheet.`setReactionAccessorySpacingDefault()`
`void`	StyleSheet.`setReactionCollapsed(boolean collapsed)`	Changes the default value of all reactions' collapsed-state in the diagram.
`void`	StyleSheet.`setReactionFillLevel(double fillLevel)`	Changes the default value for reactions' fill level.
`void`	StyleSheet.`setReactionFillLevelDefault()`	Changes the default value for reactions' fill level to application's default value.
`void`	StyleSheet.`setReactionFillLevelIndication(FillLevelIndication fillLevelIndication)`	Changes the default value for reactions' fill level Indication.
`void`	StyleSheet.`setReactionFillLevelIndicationDefault()`	Changes the default value for reactions' fill level Indication to application's default value.
`void`	Pathway.`setReactionFont(Font font)`	Changes the default font for reactions' text labels.
`void`	StyleSheet.`setReactionFont(Font font)`	Changes the default font for reactions' default text labels.
`void`	Pathway.`setReactionFontDefault()`	Changes the default font for reactions' text labels to default.
`void`	StyleSheet.`setReactionFontDefault()`	Changes the default font for reactions' default text labels to application's default value.
`void`	StyleSheet.`setReactionLabelConfiguration(LabelConfiguration configuration)`
`void`	StyleSheet.`setReactionLabelFloating(boolean floating)`
`void`	StyleSheet.`setReactionLabelHidden(boolean hidden)`
`void`	StyleSheet.`setReactionLabelPlacement(NodeLabelPlacement placement)`
`void`	Pathway.`setReactionPaint(Paint paint)`	Changes the default value for the reactions' paint.
`void`	StyleSheet.`setReactionPaint(Paint paint)`	Changes the default value for the reactions' default paint.
`void`	Pathway.`setReactionPaintDefault()`	Changes the default value for the reactions' paint to default.
`void`	StyleSheet.`setReactionPaintDefault()`	Changes the default value for the reactions' default paint to application's default value.
`void`	Pathway.`setReactionPaintDefaultToPathwayBrush()`	Changes the default value for the reactions' paint to default (to pathway brush).
`void`	Pathway.`setReactionPaintDefaultToStylesheet()`	Changes the default value for the reactions' paint to default (to style sheet).
`void`	StyleSheet.`setReactionScale(double scale)`	Changes the default value for reactions' scale.
`void`	StyleSheet.`setReactionScaleDefault()`	Changes the default value for reactions' scale to application's default value.
`void`	Pathway.`setReactionShadow(Shadow shadow)`	Changes the default value for the reactions' shadow.
`void`	StyleSheet.`setReactionShadow(Shadow shadow)`	Changes the default value for the reactions' default shadow.
`void`	Pathway.`setReactionShadowDefault()`	Changes the default value for the reactions' shadow to default.
`void`	StyleSheet.`setReactionShadowDefault()`	Changes the default value for the reactions' default shadow to application's default value.
`void`	Pathway.`setReactionShape(Shape shape)`	Changes the default value for the reactions' shape.
`void`	StyleSheet.`setReactionShape(Shape shape)`	Changes the default value for the reactions' default shape.
`void`	Pathway.`setReactionShapeDefault()`	Changes the default value for the reactions' shape to default.
`void`	StyleSheet.`setReactionShapeDefault()`	Changes the default value for the reactions' default shape to application's default value.
`void`	Pathway.`setReactionStrokeColor(Color strokeColor)`	Changes the default value for the reactions' stroke color.
`void`	StyleSheet.`setReactionStrokeColor(Color strokeColor)`	Changes the default value for the reactions' default stroke color.
`void`	Pathway.`setReactionStrokeColorDefault()`	Changes the default value for the reactions' stroke color to default.
`void`	StyleSheet.`setReactionStrokeColorDefault()`	Changes the default value for the reactions' default stroke color to application's default value.
`void`	Pathway.`setReactionStrokeStyle(StrokeStyle strokeStyle)`	Changes the default value for the reactions' stroke style.
`void`	StyleSheet.`setReactionStrokeStyle(StrokeStyle strokeStyle)`	Changes the default value for the reactions' default stroke style.
`void`	Pathway.`setReactionStrokeStyleDefault()`	Changes the default value for the reactions' stroke style to default.
`void`	StyleSheet.`setReactionStrokeStyleDefault()`	Changes the default value for the reactions' default stroke style to application's default value.
`void`	Pathway.`setReactionStrokeWidth(double strokeWidth)`	Changes the default value for the reactions' stroke width.
`void`	StyleSheet.`setReactionStrokeWidth(double strokeWidth)`	Changes the default value for the reactions' default stroke width.
`void`	Pathway.`setReactionStrokeWidthDefault()`	Changes the default value for the reactions' stroke width to default.
`void`	StyleSheet.`setReactionStrokeWidthDefault()`	Changes the default value for the reactions' default stroke width to application's default value.
`void`	Pathway.`setReactionTextBrush(Brush textBrush)`	Changes the default value for the reactions' text paint brush.
`void`	StyleSheet.`setReactionTextBrush(Brush textBrush)`	Changes the default value for the reactions' default text paint brush.
`void`	Pathway.`setReactionTextBrushDefault()`	Changes the default value for the reactions' text paint brush to default.
`void`	StyleSheet.`setReactionTextBrushDefault()`	Changes the default value for the reactions' default text paint brush to application's default value.
`void`	Pathway.`setReactionTextStrokeColor(Color textStrokeColor)`	Changes the default value for the reactions' text stroke color.
`void`	StyleSheet.`setReactionTextStrokeColor(Color textStrokeColor)`	Changes the default value for the reactions' default text stroke color.
`void`	Pathway.`setReactionTextStrokeColorDefault()`	Changes the default value for the reactions' text stroke color to default.
`void`	StyleSheet.`setReactionTextStrokeColorDefault()`	Changes the default value for the reactions' default text stroke color to application's default value.
`void`	Pathway.`setReactionTextStrokeWidth(double textStrokeWidth)`	Changes the default value for the reactions' text stroke width.
`void`	StyleSheet.`setReactionTextStrokeWidth(double textStrokeWidth)`	Changes the default value for the reactions' default text stroke width.
`void`	Pathway.`setReactionTextStrokeWidthDefault()`	Changes the default value for the reactions' text stroke width to default.
`void`	StyleSheet.`setReactionTextStrokeWidthDefault()`	Changes the default value for the reactions' default text stroke width to application's default value.
`void`	StyleSheet.`setReversibilityDesign(ReversibilityDesign reversibilityDesign)`
`void`	StyleSheet.`setReversibilityFlagsHidden(boolean hidden)`
`void`	FluxEdge.`setReversibilitySignBrush(Brush brush)`	Changes the brush of the reversibility sign (if available).
`void`	LinkEdge.FluxEdgeAppearance.`setReversibilitySignBrush(Brush brush)`	Changes the brush of the reversibility sign (if available).
`void`	FluxEdge.`setReversibilitySignBrushDefault()`	Changes the brush of the reversibility sign (if available) to default.
`void`	LinkEdge.FluxEdgeAppearance.`setReversibilitySignBrushDefault()`	Changes the brush of the reversibility sign (if available) to default.
`void`	FluxEdge.`setReversibilitySignScale(double size)`	Changes the scale of the reversibility sign (if available).
`void`	LinkEdge.FluxEdgeAppearance.`setReversibilitySignScale(double size)`	Changes the scale of the reversibility sign (if available).
`void`	FluxEdge.`setReversibilitySignScaleDefault()`	Changes the scale of the reversibility sign (if available) to default.
`void`	LinkEdge.FluxEdgeAppearance.`setReversibilitySignScaleDefault()`	Changes the scale of the reversibility sign (if available) to default.
`void`	Reaction.`setReversible(boolean reversibility)`	Changes the reversibility of the reaction.
`void`	AbstractNode.`setScale(double scale)`	The scale factor the node is displayed with.
`void`	GraphicsBox.`setScale(double scale)`	Changes the scale factor the node is displayed with.
`void`	AbstractBioNode.`setScaleDefault()`	Changes the scale factor the node is displayed with to default.
`void`	AbstractEdge.`setShadow(Shadow shadow)`	Sets the shadow of the edge.
`void`	AbstractNode.`setShadow(Shadow shadow)`	The shadow of the item.
`void`	GraphicsBox.`setShadow(Shadow shadow)`	Changes the item's shadow.
`void`	GraphicsPath.`setShadow(Shadow shadow)`	Changes the item's shadow.
`void`	AbstractBioNode.`setShadowDefault()`	Sets the shadow of the item to default.
`void`	EffectorEdge.`setShadowDefault()`	Sets the shadow of the edge to default.
`void`	FluxEdge.`setShadowDefault()`	Sets the shadow of the edge to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setShadowDefault()`	Sets the shadow of the edge to default.
`void`	LinkEdge.FluxEdgeAppearance.`setShadowDefault()`	Sets the shadow of the edge to default.
`void`	AbstractNode.`setShape(Shape shape)`	The appearance of the metabolite node in the diagram.
`void`	Compartment.`setShape(Shape shape)`	Sets the item's shape.
`void`	GraphicsBox.`setShape(Shape shape)`	Changes the appearance of the metabolite node in the diagram.
`void`	AbstractBioNode.`setShapeDefault()`	Changes the appearance of the metabolite node in the diagram to default.
`void`	Compartment.`setShapeDefault()`	Sets the item's shape.
`void`	GraphicsEdge.`setStartMarker(MarkerShape startMarker)`	Changes the shape of the start marker.
`void`	LinkEdge.GraphicsEdgeAppearance.`setStartMarker(MarkerShape startMarker)`	Changes the shape of the start marker.
`void`	GraphicsEdge.`setStartMarkerSize(double startMarkerSize)`	Changes the size of the start marker.
`void`	LinkEdge.GraphicsEdgeAppearance.`setStartMarkerSize(double startMarkerSize)`	Changes the size of the start marker.
`void`	Pathway.`setStrength(double strength)`	Changes the strength of the contour the pathway paints around its reactions and edges.
`void`	Pathway.`setStrengthDefault()`	Changes the strength of the contour the pathway paints around its reactions and edges to default.
`void`	AbstractEdge.`setStrokeColor(Color strokeColor)`	Sets the color for the stroke of the item's shape.
`void`	AbstractNode.`setStrokeColor(Color strokeColor)`	The color for the stroke of the item's shape.
`void`	Compartment.`setStrokeColor(Color strokeColor)`	Changes the color for the stroke of the item's shape.
`void`	GraphicsBox.`setStrokeColor(Color strokeColor)`	Sets the color for the stroke of the item's shape.
`void`	Pathway.`setStrokeColor(Color strokeColor)`	Changes the color for the stroke of the item's shape.
`void`	AbstractBioNode.`setStrokeColorDefault()`	Sets the color for the stroke of the item's shape to default.
`void`	Compartment.`setStrokeColorDefault()`	Changes the color for the stroke of the item's shape.
`void`	EffectorEdge.`setStrokeColorDefault()`	Sets the color for the stroke of the item's shape to default.
`void`	FluxEdge.`setStrokeColorDefault()`	Sets the color for the stroke of the item's shape to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setStrokeColorDefault()`	Sets the color for the stroke of the item's shape to default.
`void`	LinkEdge.FluxEdgeAppearance.`setStrokeColorDefault()`	Sets the color for the stroke of the item's shape to default.
`void`	Pathway.`setStrokeColorDefault()`	Changes the color for the stroke of the item's shape to default.
`void`	AbstractEdge.`setStrokeStyle(StrokeStyle strokeStyle)`	Changes the paint style for the stroke of the item's shape.
`void`	AbstractNode.`setStrokeStyle(StrokeStyle strokeStyle)`	The paint style for the stroke of the item's shape.
`void`	Compartment.`setStrokeStyle(StrokeStyle strokeStyle)`	Changes the paint style for the stroke of the item's shape.
`void`	GraphicsBox.`setStrokeStyle(StrokeStyle strokeStyle)`	Changes the paint style for the stroke of the item's shape.
`void`	Pathway.`setStrokeStyle(StrokeStyle strokeStyle)`	Changes the paint style for the stroke of the item's shape.
`void`	AbstractBioNode.`setStrokeStyleDefault()`	Changes the paint style for the stroke of the item's shape to default.
`void`	Compartment.`setStrokeStyleDefault()`	Changes the paint style for the stroke of the item's shape.
`void`	EffectorEdge.`setStrokeStyleDefault()`	Changes the paint style for the stroke of the item's shape to default.
`void`	FluxEdge.`setStrokeStyleDefault()`	Changes the paint style for the stroke of the item's shape to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setStrokeStyleDefault()`	Changes the paint style for the stroke of the item's shape to default.
`void`	LinkEdge.FluxEdgeAppearance.`setStrokeStyleDefault()`	Changes the paint style for the stroke of the item's shape to default.
`void`	Pathway.`setStrokeStyleDefault()`	Changes the paint style for the stroke of the item's shape to default.
`void`	AbstractEdge.`setStrokeWidth(double strokeWidth)`	Changes the stroke width of the item's shape.
`void`	AbstractNode.`setStrokeWidth(double strokeWidth)`	The stroke width of the item's shape.
`void`	Compartment.`setStrokeWidth(double strokeWidth)`	Changes the stroke width of the item's shape.
`void`	GraphicsBox.`setStrokeWidth(double strokeWidth)`	Changes the stroke width of the item's shape.
`void`	Pathway.`setStrokeWidth(double strokeWidth)`	Changes the stroke width of the item's shape.
`void`	AbstractBioNode.`setStrokeWidthDefault()`	Changes the stroke width of the item's shape to default.
`void`	Compartment.`setStrokeWidthDefault()`	Changes the stroke width of the item's shape.
`void`	EffectorEdge.`setStrokeWidthDefault()`	Changes the stroke width of the item's shape to default.
`void`	FluxEdge.`setStrokeWidthDefault()`	Changes the stroke width of the item's shape to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setStrokeWidthDefault()`	Changes the stroke width of the item's shape to default.
`void`	LinkEdge.FluxEdgeAppearance.`setStrokeWidthDefault()`	Changes the stroke width of the item's shape to default.
`void`	Pathway.`setStrokeWidthDefault()`	Changes the stroke width of the item's shape to default.
`default void`	Compartment.`setSynonym(int index, String synonymPlain)`	Sets the synonym at the given position.
`void`	Compartment.`setSynonym(int index, String synonymPlain, String synonymRichText)`	Sets the synonym at the given position.
`default void`	MetaboliteType.`setSynonym(int index, String synonymPlain)`	Sets the synonym at the given position.
`void`	MetaboliteType.`setSynonym(int index, String synonymPlain, String synonymRichText)`	Sets the synonym at the given position.
`default void`	Pathway.`setSynonym(int index, String synonymPlain)`	Sets the synonym at the given position.
`void`	Pathway.`setSynonym(int index, String synonymPlain, String synonymRichText)`	Sets the synonym at the given position.
`default void`	Reaction.`setSynonym(int index, String synonymPlain)`	Sets the synonym at the given position.
`void`	Reaction.`setSynonym(int index, String synonymPlain, String synonymRichText)`	Sets the synonym at the given position.
`void`	GraphicsBox.`setText(String text)`	Changes the item's text label.
`void`	GraphicsNode.`setText(String text)`	Changes the item's text label.
`void`	Link.`setText(String text)`	Changes the item's text label.
`void`	AbstractNode.`setTextBrush(Brush textBrush)`	The fill brush of the item's text label.
`void`	Compartment.`setTextBrush(Brush textBrush)`	Changes the fill brush of the item's text label.
`void`	Pathway.`setTextBrush(Brush textBrush)`	Changes the fill brush of the item's text label.
`void`	AbstractBioNode.`setTextBrushDefault()`	Changes the fill brush of the item's text label to default.
`void`	Compartment.`setTextBrushDefault()`	Changes the fill brush of the item's text label.
`void`	Pathway.`setTextBrushDefault()`	Changes the fill brush of the item's text label to default.
`void`	AbstractNode.`setTextStrokeColor(Color textStrokeColor)`	The color for the stroke of the item's text label.
`void`	Compartment.`setTextStrokeColor(Color textStrokeColor)`	Changes the color for the stroke of the item's text label.
`void`	Pathway.`setTextStrokeColor(Color textStrokeColor)`	Changes the color for the stroke of the item's text label.
`void`	AbstractBioNode.`setTextStrokeColorDefault()`	Changes the color for the stroke of the item's text label to default.
`void`	Compartment.`setTextStrokeColorDefault()`	Changes the color for the stroke of the item's text label.
`void`	Pathway.`setTextStrokeColorDefault()`	Changes the color for the stroke of the item's text label to default.
`void`	AbstractNode.`setTextStrokeWidth(double textStrokeWidth)`	The stroke width of the item's text label.
`void`	Compartment.`setTextStrokeWidth(double textStrokeWidth)`	Changes the stroke width of the item's text label.
`void`	Pathway.`setTextStrokeWidth(double textStrokeWidth)`	Changes the stroke width of the item's text label.
`void`	AbstractBioNode.`setTextStrokeWidthDefault()`	Changes the stroke width of the item's text label to default.
`void`	Compartment.`setTextStrokeWidthDefault()`	Changes the stroke width of the item's text label.
`void`	Pathway.`setTextStrokeWidthDefault()`	Changes the stroke width of the item's text label to default.
`void`	AbstractEdge.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	AbstractNode.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	Compartment.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	GraphicsBox.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	GraphicsPath.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	Pathway.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	AbstractBioNode.`setTransparencyDefault()`	Changes the transparency of the item's shape to default.
`void`	Compartment.`setTransparencyDefault()`	Changes the transparency of the item's shape to default.
`void`	EffectorEdge.`setTransparencyDefault()`	Changes the transparency of the item's shape to default.
`void`	FluxEdge.`setTransparencyDefault()`	Changes the transparency of the item's shape to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setTransparencyDefault()`	Changes the transparency of the item's shape to default.
`void`	LinkEdge.FluxEdgeAppearance.`setTransparencyDefault()`	Changes the transparency of the item's shape to default.
`void`	Pathway.`setTransparencyDefault()`	Changes the transparency of the item's shape to default.
`void`	EffectorEdge.`setUnknownEffectBrush(Brush value)`	Changes the paint brush that the effector edge shows as unknown effect.
`void`	LinkEdge.EffectorEdgeAppearance.`setUnknownEffectBrush(Brush value)`	Changes the paint brush that the effector edge shows as unknown effect.
`void`	EffectorEdge.`setUnknownEffectBrushDefault()`	Changes the paint brush that the effector edge shows as unknown effect to default.
`void`	LinkEdge.EffectorEdgeAppearance.`setUnknownEffectBrushDefault()`	Changes the paint brush that the effector edge shows as unknown effect to default.
`void`	StyleSheet.`setUseVisualizingOnDemand(boolean useVisualizingOnDemand)`
`void`	GraphicsBox.`setVerticalTextAlignment(VerticalAlignment verticalTextAlignment)`	Vertical text alignment

Uses of IllegalChangeException in omix.plugin.model.writable.accessory

Methods in omix.plugin.model.writable.accessory that throw IllegalChangeException
Modifier and Type	Method	Description
`void`	Array.`setCount(int size)`
`void`	Accessory.`setLabel(String label)`
`void`	Array.`setOrientation(Orientation orientation)`
`void`	Accessory.`setTooltip(String toolTip)`
`void`	Accessory.`setVisible(boolean visible)`
`void`	Array.`setVisible(boolean visible)`

Uses of IllegalChangeException in omix.plugin.model.writable.accessory.annotation

Methods in omix.plugin.model.writable.accessory.annotation that throw IllegalChangeException
Modifier and Type	Method	Description
`void`	ImageField.`setBackground(Color background)`	The background color.
`void`	SimpleValueField.`setBackground(Color background)`	The background color.
`void`	AbstractSideBox.`setBlur(double blur)`	The accessory blur.
`void`	ImageField.`setBlur(double blur)`	The accessory blur.
`void`	ItemGroup.`setBlur(double blur)`	The accessory blur.
`void`	SimpleValueField.`setBlur(double blur)`	The accessory blur.
`void`	ItemGroup.`setBrush(Brush brush)`	The highlighting brush.
`void`	AbstractSideBox.`setCentric(boolean centric)`
`void`	ChartSideBox.`setChart(Chart chart)`	The chat displayed in the network diagram.
`void`	SimpleValueField.`setColor(Color color)`	The text color.
`void`	DoubleField.`setDecimalFormat(DecimalFormat decimalFormat)`	The decimal format defines, how the double value is formatted to textual representation.
`void`	SideBox.`setFillLevel(double fillLevel)`	The filling level of the item's shape given as percentage value.
`void`	SideBox.`setFillLevelIndication(FillLevelIndication fillLevelIndication)`	The indication for filling of the item's shape.
`void`	ItemGroup.`setFont(Font font)`	The annotation's text label font.
`void`	SideBox.`setFont(Font font)`	The font of the text label of the item.
`void`	SimpleValueField.`setFont(Font font)`	The annotation's text label font.
`void`	AbstractSideBox.`setHeight(double height)`	The height of the chart item.
`void`	ImageField.`setImage(Image image)`	The image displayed in the network diagram.
`void`	SideBox.`setPaint(Paint paint)`	The fill appearance of the item's shape.
`void`	AbstractSideBox.`setScale(double scale)`	The scale factor of the chart item.
`void`	ImageField.`setScale(double scale)`	The scale factor the image is displayed with.
`void`	AbstractSideBox.`setShadow(Shadow shadow)`	The accessory shadow.
`void`	ImageField.`setShadow(Shadow shadow)`	The accessory shadow.
`void`	SimpleValueField.`setShadow(Shadow shadow)`	The accessory shadow.
`void`	SideBox.`setShape(Shape shape)`	The appearance of the node in the diagram.
`void`	AbstractSideBox.`setSize(double width, double height)`	Changes the item's size.
`void`	SideBox.`setSize(double width, double height)`	Changes the item's size.
`void`	AbstractSideBox.`setStrokeColor(Color strokeColor)`	The color for the stroke around the image.
`void`	ImageField.`setStrokeColor(Color strokeColor)`	The color for the stroke around the image.
`void`	AbstractSideBox.`setStrokeStyle(StrokeStyle strokeStyle)`	The paint style for the stroke around the image.
`void`	ImageField.`setStrokeStyle(StrokeStyle strokeStyle)`	The paint style for the stroke around the image.
`void`	AbstractSideBox.`setStrokeWidth(double strokeWidth)`	The stroke width.
`void`	ImageField.`setStrokeWidth(double strokeWidth)`	The stroke width.
`void`	ItemGroup.`setText(String text)`	The text to be displayed by this item group.
`void`	SideBox.`setText(String text)`	The text to be displayed by this sub node.
`void`	ItemGroup.`setTextBlur(double textBlur)`	The annotation's text blur.
`void`	SideBox.`setTextBrush(Brush textBrush)`	The fill brush of the item's text label.
`void`	ItemGroup.`setTextShadow(Shadow textShadow)`	The annotation's text shadow.
`void`	ItemGroup.`setTextStrokeColor(Color textStrokeColor)`	The color for the stroke of the item's text label.
`void`	SideBox.`setTextStrokeColor(Color textStrokeColor)`	The color for the stroke of the item's text label.
`void`	ItemGroup.`setTextStrokeWidth(double textStrokeWidth)`	The stroke width of the item's text label given as real number.
`void`	SideBox.`setTextStrokeWidth(double textStrokeWidth)`	The stroke width of the item's text label.
`void`	AbstractSideBox.`setTransparency(double transparency)`	The accessory transparency.
`void`	ImageField.`setTransparency(double transparency)`	The accessory transparency.
`void`	ItemGroup.`setTransparency(double transparency)`	The accessory transparency.
`void`	SimpleValueField.`setTransparency(double transparency)`	The accessory transparency.
`void`	DoubleField.`setValue(Double value)`	The value displayed in the network diagram.
`void`	IntegerField.`setValue(Integer value)`	The value displayed in the network diagram.
`void`	ObjectField.`setValue(T value)`	The value displayed in the network diagram.
`void`	TextField.`setValue(String value)`
`void`	SideBox.`setVerticalTextAlignment(VerticalAlignment verticalTextAlignment)`	Vertical text alignment
`void`	DataAnnotation.`setVisible(boolean visible)`	The visible state of the accessory.
`void`	AbstractSideBox.`setWidth(double width)`	The width of the chart item.
`void`	ItemGroup.`setWidth(double width)`	The width of the contour highlighting the items.
`void`	SideBox.`setWrapTextInShape(boolean wrapTextInShape)`

Uses of IllegalChangeException in omix.plugin.model.writable.accessory.trigger

Methods in omix.plugin.model.writable.accessory.trigger that throw IllegalChangeException
Modifier and Type	Method	Description
`void`	CheckButton.`setChecked(boolean checked)`
`void`	Trigger.`setEnabled(boolean enabled)`
`void`	DoubleTrigger.`setMaximum(double maximum)`
`void`	IntegerTrigger.`setMaximum(int maximum)`
`void`	DoubleTrigger.`setMinimum(double minimum)`
`void`	IntegerTrigger.`setMinimum(int minimum)`
`void`	DoublePlayer.`setMinimumSpeed(int minimumSpeed)`
`void`	Player.`setMinimumSpeed(int minimumSpeed)`
`void`	DoubleTrigger.`setRecordEnabled(boolean recordEnabled)`
`void`	IntegerTrigger.`setRecordEnabled(boolean recordEnabled)`
`void`	DoublePlayer.`setStep(double step)`
`void`	Player.`setStep(int step)`
`void`	DoubleTrigger.`setValue(double value)`
`void`	IntegerTrigger.`setValue(int value)`

Uses of IllegalChangeException in omix.plugin.model.writable.points

Methods in omix.plugin.model.writable.points that throw IllegalChangeException
Modifier and Type	Method	Description
`void`	Arc.`setLength(double length)`
`void`	AbstractCurvePoint.`setPosition(double x, double y)`
`default void`	Arc.`setRadius(double radius)`
`void`	Arc.`setRadius(double radiusX, double radiusY)`
`void`	SplinePoint.`setSmoothness(Smoothness smoothness)`
`void`	Arc.`setStartAngle(double startAngle)`

Uses of IllegalChangeException in omix.plugin.motifstamp.writable

Methods in omix.plugin.motifstamp.writable that throw IllegalChangeException
Modifier and Type	Method	Description
`void`	EffectorEdge.`setActivationBrush(Brush value)`	Changes the paint brush that the effector edge shows as activation.
`void`	EffectorEdge.`setArrowSize(double arrowSize)`	Changes the arrow size.
`void`	FluxEdge.`setArrowSize(double arrowSize)`	Changes the arrow size.
`void`	GraphicsNode.`setBlur(double blur)`	The blur of the node.
`void`	Metabolite.`setBlur(double blur)`	The blur of the node.
`void`	FluxEdge.`setBrush(Brush brush)`	Sets the fill brush of the item's shape.
`void`	GraphicsEdge.`setBrush(Brush brush)`	Sets the fill brush of the item's shape.
`void`	FluxEdge.`setCoefficient(double coefficient)`	Changes the edge coefficient.
`void`	FluxEdge.`setCoefficientBrush(Brush brush)`	Changes the brush of the edge's coefficient.
`void`	FluxEdge.`setCoefficientFont(Font font)`	Changes the font of the edge's coefficient.
`void`	FluxEdge.`setCofactor(boolean isCofactor)`	Changes the cofactor state of the edge.
`void`	GraphicsNode.`setCollapsed(boolean collapsed)`
`void`	Metabolite.`setCollapsed(boolean collapsed)`
`void`	EffectorEdge.`setDefaultActivationBrush()`	Changes the paint brush that the effector edge shows as activation to default.
`void`	EffectorEdge.`setDefaultArrowSize()`	Changes the arrow size to default.
`void`	FluxEdge.`setDefaultArrowSize()`	Changes the arrow size to default.
`void`	Metabolite.`setDefaultBlur()`	The blur of the node.
`void`	FluxEdge.`setDefaultBrush()`	Sets the fill brush of the item's shape to default.
`void`	FluxEdge.`setDefaultCoefficientBrush()`	Changes the brush of the edge's coefficient to default.
`void`	FluxEdge.`setDefaultCoefficientFont()`	Changes the font of the edge's coefficient to default.
`void`	Metabolite.`setDefaultCollapsed()`
`void`	Metabolite.`setDefaultFillLevel()`	Changes the fill level of the item's shape to default value.
`void`	Metabolite.`setDefaultFillLevelIndication()`	Changes the indication for filling of the item's shape to default.
`void`	Metabolite.`setDefaultFont()`	Changes the font of the text label of the item to default.
`void`	EffectorEdge.`setDefaultInhibitionBrush()`	Changes the paint brush that the effector edge shows as inhibition to default.
`void`	EffectorEdge.`setDefaultLineStyle()`	Changes the line style of the edge to default.
`void`	FluxEdge.`setDefaultLineStyle()`	Changes the line style of the edge to default.
`void`	EffectorEdge.`setDefaultLineWidth()`	Changes the line width of the edge to default.
`void`	FluxEdge.`setDefaultLineWidth()`	Changes the line width of the edge to default.
`void`	Metabolite.`setDefaultPaint()`	Sets the fill appearance of the item's shape to default.
`void`	FluxEdge.`setDefaultReversibilitySignBrush()`	Changes the brush of the reversibility sign (if available) to default.
`void`	FluxEdge.`setDefaultReversibilitySignScale()`	Changes the scale of the reversibility sign (if available) to default.
`void`	Metabolite.`setDefaultScale()`	Changes the scale factor the node is displayed with to default.
`void`	EffectorEdge.`setDefaultShadow()`	Sets the shadow of the edge to default.
`void`	FluxEdge.`setDefaultShadow()`	Sets the shadow of the edge to default.
`void`	Metabolite.`setDefaultShadow()`	Sets the shadow of the item to default.
`void`	Metabolite.`setDefaultShape()`	Changes the appearance of the metabolite node in the diagram to default.
`void`	EffectorEdge.`setDefaultStrokeColor()`	Sets the color for the stroke of the item's shape to default.
`void`	FluxEdge.`setDefaultStrokeColor()`	Sets the color for the stroke of the item's shape to default.
`void`	Metabolite.`setDefaultStrokeColor()`	Sets the color for the stroke of the item's shape to default.
`void`	EffectorEdge.`setDefaultStrokeStyle()`	Changes the paint style for the stroke of the item's shape to default.
`void`	FluxEdge.`setDefaultStrokeStyle()`	Changes the paint style for the stroke of the item's shape to default.
`void`	Metabolite.`setDefaultStrokeStyle()`	Changes the paint style for the stroke of the item's shape to default.
`void`	EffectorEdge.`setDefaultStrokeWidth()`	Changes the stroke width of the item's shape to default.
`void`	FluxEdge.`setDefaultStrokeWidth()`	Changes the stroke width of the item's shape to default.
`void`	Metabolite.`setDefaultStrokeWidth()`	Changes the stroke width of the item's shape to default.
`void`	Metabolite.`setDefaultTextBrush()`	Changes the fill brush of the item's text label to default.
`void`	Metabolite.`setDefaultTextStrokeColor()`	Changes the color for the stroke of the item's text label to default.
`void`	Metabolite.`setDefaultTextStrokeWidth()`	Changes the stroke width of the item's text label to default.
`void`	EffectorEdge.`setDefaultTransparency()`	Changes the transparency of the item's shape to default.
`void`	FluxEdge.`setDefaultTransparency()`	Changes the transparency of the item's shape to default.
`void`	Metabolite.`setDefaultTransparency()`	Changes the transparency of the item's shape to default.
`void`	EffectorEdge.`setDefaultUnknownEffectBrush()`	Changes the paint brush that the effector edge shows as unknown effect to default.
`void`	AbstractEdge.`setDockingPositions(DockingPosition srcPort, DockingPosition dstPort)`	Changes the docking positions of the edge at the source and destination nodes.
`void`	EffectorEdge.`setEffect(double effect)`	Changes the edge's effect value.
`void`	GraphicsEdge.`setEndMarker(MarkerShape endMarker)`	Changes the shape of the end marker.
`void`	GraphicsEdge.`setEndMarkerSize(double endMarkerSize)`	Changes the size of the end marker.
`void`	GraphicsNode.`setFillLevel(double fillLevel)`	The filling level of the item's shape given as percentage value.
`void`	Metabolite.`setFillLevel(double fillLevel)`	The filling level of the item's shape given as percentage value.
`void`	GraphicsNode.`setFillLevelIndication(FillLevelIndication fillLevelIndication)`	The indication for filling of the item's shape.
`void`	Metabolite.`setFillLevelIndication(FillLevelIndication fillLevelIndication)`	The indication for filling of the item's shape.
`void`	GraphicsNode.`setFont(Font font)`	The font of the text label of the item.
`void`	Metabolite.`setFont(Font font)`	The font of the text label of the item.
`void`	GraphicsNode.`setHidden(boolean hidden)`	Changes the visibility of the item in the diagram.
`void`	Metabolite.`setHidden(boolean hidden)`	Changes the visibility of the item in the diagram.
`void`	MotifStamp.`setIdentifier(String identifier)`
`void`	EffectorEdge.`setInhibitionBrush(Brush value)`	Changes the paint brush that the effector edge shows as inhibition.
`void`	Metabolite.`setLabel(String plainText, String richText)`
`void`	GraphicsNode.`setLabelPosition(double labelX, double labelY)`	Changes the position of the item's label.
`void`	Metabolite.`setLabelPosition(double labelX, double labelY)`	Changes the position of the item's label.
`void`	GraphicsNode.`setLabelRotation(double labelRotation)`	Changes the rotation of the position of the item's label.
`void`	Metabolite.`setLabelRotation(double labelRotation)`	Changes the rotation of the position of the item's label.
`void`	AbstractEdge.`setLineStyle(StrokeStyle lineStyle)`	Changes the line style of the edge.
`void`	AbstractEdge.`setLineWidth(double lineWidth)`	Changes the line width of the edge.
`void`	GraphicsNode.`setPaint(Paint paint)`	Sets the fill appearance of the item's shape.
`void`	Metabolite.`setPaint(Paint paint)`	Sets the fill appearance of the item's shape.
`void`	GraphicsNode.`setPosition(double x, double y)`	Set the position of the item.
`void`	Metabolite.`setPosition(double x, double y)`	Set the position of the item.
`void`	FluxEdge.`setReversibilitySignBrush(Brush brush)`	Changes the brush of the reversibility sign (if available).
`void`	FluxEdge.`setReversibilitySignScale(double size)`	Changes the scale of the reversibility sign (if available).
`void`	GraphicsNode.`setScale(double scale)`	The scale factor the node is displayed with.
`void`	Metabolite.`setScale(double scale)`	The scale factor the node is displayed with.
`void`	AbstractEdge.`setShadow(Shadow shadow)`	Sets the shadow of the edge.
`void`	GraphicsNode.`setShadow(Shadow shadow)`	The shadow of the item.
`void`	Metabolite.`setShadow(Shadow shadow)`	The shadow of the item.
`void`	GraphicsNode.`setShape(Shape shape)`	The appearance of the metabolite node in the diagram.
`void`	Metabolite.`setShape(Shape shape)`	The appearance of the metabolite node in the diagram.
`void`	GraphicsNode.`setSize(double width, double height)`	Changes the item's size.
`void`	Metabolite.`setSize(double width, double height)`	Changes the item's size.
`void`	GraphicsEdge.`setStartMarker(MarkerShape startMarker)`	Changes the shape of the start marker.
`void`	GraphicsEdge.`setStartMarkerSize(double startMarkerSize)`	Changes the size of the start marker.
`void`	AbstractEdge.`setStrokeColor(Color strokeColor)`	Sets the color for the stroke of the item's shape.
`void`	GraphicsNode.`setStrokeColor(Color strokeColor)`	The color for the stroke of the item's shape.
`void`	Metabolite.`setStrokeColor(Color strokeColor)`	The color for the stroke of the item's shape.
`void`	AbstractEdge.`setStrokeStyle(StrokeStyle strokeStyle)`	Changes the paint style for the stroke of the item's shape.
`void`	GraphicsNode.`setStrokeStyle(StrokeStyle strokeStyle)`	The paint style for the stroke of the item's shape.
`void`	Metabolite.`setStrokeStyle(StrokeStyle strokeStyle)`	The paint style for the stroke of the item's shape.
`void`	AbstractEdge.`setStrokeWidth(double strokeWidth)`	Changes the stroke width of the item's shape.
`void`	GraphicsNode.`setStrokeWidth(double strokeWidth)`	The stroke width of the item's shape.
`void`	Metabolite.`setStrokeWidth(double strokeWidth)`	The stroke width of the item's shape.
`void`	GraphicsNode.`setText(String text)`
`void`	GraphicsNode.`setTextBrush(Brush textBrush)`	The fill brush of the item's text label.
`void`	Metabolite.`setTextBrush(Brush textBrush)`	The fill brush of the item's text label.
`void`	GraphicsNode.`setTextStrokeColor(Color textStrokeColor)`	The color for the stroke of the item's text label.
`void`	Metabolite.`setTextStrokeColor(Color textStrokeColor)`	The color for the stroke of the item's text label.
`void`	GraphicsNode.`setTextStrokeWidth(double textStrokeWidth)`	The stroke width of the item's text label.
`void`	Metabolite.`setTextStrokeWidth(double textStrokeWidth)`	The stroke width of the item's text label.
`void`	AbstractEdge.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	GraphicsNode.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	Metabolite.`setTransparency(double transparency)`	Changes the transparency of the item's shape.
`void`	EffectorEdge.`setUnknownEffectBrush(Brush value)`	Changes the paint brush that the effector edge shows as unknown effect.

Uses of Classomix.plugin.util.IllegalChangeException

Uses of IllegalChangeException in omix.plugin.diagram.writable

Uses of IllegalChangeException in omix.plugin.diagram.writable.accessory

Uses of IllegalChangeException in omix.plugin.diagram.writable.accessory.annotation

Uses of IllegalChangeException in omix.plugin.diagram.writable.pattern

Uses of IllegalChangeException in omix.plugin.model.accessory.annotation

Uses of IllegalChangeException in omix.plugin.model.writable

Uses of IllegalChangeException in omix.plugin.model.writable.accessory

Uses of IllegalChangeException in omix.plugin.model.writable.accessory.annotation

Uses of IllegalChangeException in omix.plugin.model.writable.accessory.trigger

Uses of IllegalChangeException in omix.plugin.model.writable.points

Uses of IllegalChangeException in omix.plugin.motifstamp.writable

Uses of Class
omix.plugin.util.IllegalChangeException