Omix in Literature

Here, a selection of third party publications is listed that include visualizations created with Omix:

  • Bartek, Tobias; Blombach, Bastian; Lang, Siegmund; Eikmanns, Bernhard J.; Wiechert, Wolfgang; Oldiges, Marco; Nöh, Katharina; Noack, Stephan Comparative 13C metabolic flux analysis of pyruvate dehydrogenase complex-deficient, L-valine-producing Corynebacterium glutamicum. Appl Environ Microbiol 2011, 77, 18, 6644–6652. DOI: 10.1128/AEM.00575-11

  • Beste, Dany J. V.; Bonde, Bhushan; Hawkins, Nathaniel; Ward, Jane L.; Beale, Michael H.; Noack, Stephan; Nöh, Katharina and Kruger, Nicholas J.; Ratcliffe, R. George; McFadden, Johnjoe 13C Metabolic Flux Analysis Identifies an Unusual Route for Pyruvate Dissimilation in Mycobacteria which Requires Isocitrate Lyase and Carbon Dioxide Fixation. PLoS Pathog 2011, 7, 7, e1002091. DOI: 10.1371/journal.ppat.1002091

  • Ebert, Birgitta E.; Lamprecht, Anna-Lena; Steffen, Bernhard and Blank, Lars M. Flux-P: Automating Metabolic Flux Analysis. Metabolites 2012, 2, 4, 872–890. DOI: 10.3390/metabo2040872

  • Hanke, Tanja; Nöh, Katharina; Noack, Stephan; Polen, Tino; Bringer, Stephanie; Sahm, Hermann; Wiechert, Wolfgang and Bott, Michael Combined Fluxomics and Transcriptomics Analysis of Glucose Catabolism via a Partially Cyclic Pentose Phosphate Pathway in Gluconobacter oxydans 621H. Appl Environ Microbiol 2013, 79, 7, 2336–2348. DOI: 10.1128/AEM.03414-12

  • Lien, Stina K.; Sletta, Håvard; Ellingsen, Trond E. and Valla, Svein; Correa, Elon; Goodacre, Royston; Vernstad, Kai; Borgos, Sven Even Finborud; Bruheim, Per Investigating alginate production and carbon utilization in Pseudomonas fluorescens SBW25 using mass spectrometry-based metabolic profiling. Metabolomics 2012, 1-15. DOI: 10.1007/s11306-012-0454-0

  • Stephan Miebach Characterization and Validation of 13C Metabolic Flux Analysis in a Parallel Approach (in German). Dissertation 2011,

  • Nöh, Katharina; Wiechert, Wolfgang The benefits of being transient: isotope-based metabolic flux analysis at the short time scale. Appl Microbiol Biotechnol 2011, 91, 5, 1247–1265. DOI: 10.1007/s00253-011-3390-4

  • Noack, Stephan; Nöh, Katharina; Moch, Matthias; Oldiges, Marco; Wiechert, Wolfgang Stationary versus non-stationary (13)C-MFA: a comparison using a consistent dataset. J Biotechnol 2011, 154, 2-3, 179–190. DOI: 10.1016/j.jbiotec.2010.07.008

  • Simon Pflug Global Metabolome Analysis of Corynebacterium glutamicum (in German). Dissertation 2011,

  • Zhao, Zheng; ten Pierick, Angela; de Jonge, Lodewijk; Heijnen, Joseph; Wahl, S Aljoscha Substrate cycles in Penicillium chrysogenum quantified by isotopic non-stationary flux analysis. Microbial Cell Factories 2012, 11, 1, 140. DOI: 10.1186/1475-2859-11-140

  • Voges, Raphael; Noack, Stephan Quantification of proteome dynamics in Corynebacterium glutamicum by (15)N-labeling and selected reaction monitoring. J Proteomics 2012, 75, 9, 2660–2669. DOI: 10.1016/j.jprot.2012.03.020

  • van Ooyen, Jan; Noack, Stephan; Bott, Michael; Reth, Alexander and Eggeling, Lothar Improved L-lysine production with Corynebacterium glutamicum and systemic insight into citrate synthase flux and activity. Biotechnol Bioeng 2012, 109, 8, 2070–2081. DOI: 10.1002/bit.24486